If Intel is telling you that they don't support your glibc version, I
wouldn't be surprised by random segv's in any application that you
build on that platform (including Open MPI).
On Dec 5, 2007, at 9:59 AM, de Almeida, Valmor F. wrote:
Attached is the config.log file for intel 9.1.052. I've also tried the
intel 10.1.008 and posted to this list the config.log on a previous
e-mail (12/2/2007).
Here are the key commands for building and installing
export FC=ifort
export F77=ifort
export CXX=icpc
export CC=icc
./configure --prefix=/usr/local/packages/openmpi-1.2.4_intel-9.1.052
--with-mpi-param_check=always --with-mpi-f90-size=medium
--with-f90-max-array-dim=4 CC=icc CXX=icpc F90=ifort F77=ifort
make -j 2
make -j 2 install
Here is some info on my system
->emerge --info
Portage 2.1.3.19 (default-linux/x86/2007.0, gcc-4.1.2, glibc-2.6.1-r0,
2.6.22.9 i686)
=================================================================
System uname: 2.6.22.9 i686 Intel(R) Xeon(TM) CPU 2.66GHz
Timestamp of tree: Sat, 17 Nov 2007 04:30:01 +0000
app-shells/bash: 3.2_p17
dev-java/java-config: 1.3.7, 2.0.33-r1
dev-lang/python: 2.4.4-r6
dev-python/pycrypto: 2.0.1-r6
sys-apps/baselayout: 1.12.9-r2
sys-apps/sandbox: 1.2.18.1-r2
sys-devel/autoconf: 2.13, 2.61-r1
sys-devel/automake: 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10
sys-devel/binutils: 2.18-r1
sys-devel/gcc-config: 1.3.16
sys-devel/libtool: 1.5.24
virtual/os-headers: 2.6.22-r2
Here is
->echo $PATH
/opt/cubit:/opt/gambit/bin:/opt/compilers/intel/idb/9.1.052/bin:/opt/
com
pilers/intel/fc/9.1.052/bin:/opt/compilers/intel/cc/9.1.052/bin:/usr/
loc
al/nwchem/bin:/usr/local/visit/bin:/usr/local/ompi_intel/bin:/usr/
local/
sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin:/usr/i686-
pc-
linux-gnu/gcc-bin/4.1.2:/usr/local/packages/cca-
tools-0.6.4_gcc-4.1.2/bi
n:/usr/bin:/opt/chpl/bin/linux
Here is
->echo $LD_LIBRARY_PATH
/opt/compilers/intel/fc/9.1.052/lib:/opt/compilers/intel/cc/9.1.052/
lib:
/usr/local/ompi_intel/lib::/usr/local/packages/cca-
tools-0.6.4_gcc-4.1.2
/lib
I am also copying this to the person at Intel who is looking at the
problem, and here is a posting from the Intel Premier Support (Issue
number: 461117) for this case
12/04/2007
Valmor,
Thanks for your submission. The Intel compilers have supported the 2.6
Linux kernel for some time now, but they do not yet support glibc 2.6.
The most recent version of glibc supported is 2.5, as represented by
the
Red Hat Enterprise Linux 5 and Ubuntu 7.04 distributions. There are
known issues with Ubuntu 7.10, for example, which has a later glibc.
What version of Gentoo are you using, and do you have the option to
try
an older glibc and gcc along with the Intel compiler version 10.1?
It's not sure that the glibc version is the problem, so I will try to
build OpenMPI with glibc 2.5 on Red Hat EL5 or Ubuntu 7.04 to see if
that shows any problems.
Regards,
Martyn
12/05/2007
Martyn,
During the installation of 10.1.008, the install script says that
glibc
2.6 is supported.
--
Valmor
Thanks for your help.
--
Valmor
-----Original Message-----
From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org]
On
Behalf Of Jeff Squyres
Sent: Tuesday, December 04, 2007 5:58 PM
To: Open MPI Users
Subject: Re: [OMPI users] suggested intel compiler version for
openmpi-
1.2.4
I have compiled Open MPI with Intel 10.0 and 9.1 with no problems on
RHEL4U4.
Can you send all the info that you can (obviously, ompi_info won't
run) from http://www.open-mpi.org/community/help/ ?
On Dec 4, 2007, at 4:26 PM, de Almeida, Valmor F. wrote:
Hello,
What is the suggested intel compiler version to compile
openmpi-1.2.4?
I tried versions 10.1.008 and 9.1.052 and no luck in getting a
working
library. In both cases I get:
->mpic++ --showme
Segmentation fault
->ompi_info
Segmentation fault
Thanks for your help.
--
Valmor de Almeida
_______________________________________________
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users
--
Jeff Squyres
Cisco Systems
_______________________________________________
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users
<config.log.bz2>_______________________________________________
users mailing list
us...@open-mpi.org
http://www.open-mpi.org/mailman/listinfo.cgi/users
--
Jeff Squyres
Cisco Systems
