Let me look into that. The system is a Rocks cluster, so with any luck they'll have an updated 'roll' that will make it easy to update.
Thanks for the link, Mike -----Original Message----- From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf Of Jeff Squyres Sent: Monday, November 05, 2007 16:44 To: Open MPI Users Subject: Re: [OMPI users] Compiling OpenMPI 1.2.4 with Topspin Infinibandsupport "IPO link: can not find -lvapi" Is there any chance that you can upgrade to the OFED IB stack? Cisco is recommending OFED to all of its customers who are able to upgrade: http://www.open-mpi.org/faq/?category=openfabrics#vapi-support If you can't upgrade, we'll continue to diagnose (please see http://www.open-mpi.org/community/help/) , but I thought I'd at least ask... On Nov 5, 2007, at 5:39 PM, Mike Hanby wrote: > Howdy, > > I'm attempting to compile OpenMPI using Intel compilers (9.1.047) > with Topspin Infiniband support (on CentOS 4.4 64bit). > > Configuring: > > ./configure CC=icc CXX=icpc FC=ifort F77=ifort F90=ifort --with- > mvapi=/usr/local/topspin --with-mvapi-libdir=/usr/local/topspin/ > lib64 --enable-static --prefix=/share/apps/openmpi/intel/ > openmpi-1.2.4-64 > > make runs for 5 minutes or so and errors with: > > IPO link: can not find -lvapi > icc: error: problem during multi-file optimization compilation (code > 1) > make[2]: *** [libmpi.la] Error 1 > make[2]: Leaving directory `/home/makeuser/tmp/openmpi/ > openmpi-1.2.4_64/openmpi-1.2.4/ompi' > make[1]: *** [install-recursive] Error 1 > make[1]: Leaving directory `/home/makeuser/tmp/openmpi/ > openmpi-1.2.4_64/openmpi-1.2.4/ompi' > > I used the same configuration for OpenMPI 1.1.2 and it compiled and > installed successfully. > > Any suggestions? > > The following are the last several lines in the make log file: > ==================================================================== > libtool: compile: /share/apps/intel/cce/9.1.047/bin/icc - > DHAVE_CONFIG_H -I. -I../opal/include -I../orte/include -I../ompi/ > include -I.. -I/share/apps/intel/cce/9.1.047/include -O3 -DNDEBUG - > finline-functions -fno-strict-aliasing -restrict -pthread -MT > runtime/ompi_mpi_params.lo -MD -MP -MF runtime/.deps/ > ompi_mpi_params.Tpo -c runtime/ompi_mpi_params.c -o runtime/ > ompi_mpi_params.o >/dev/null 2>&1 > depbase=`echo runtime/ompi_mpi_preconnect.lo | sed 's|[^/]*$|.deps/ > &|;s|\.lo$||'`;\ > /bin/sh ../libtool --tag=CC --mode=compile /share/apps/intel/cce/ > 9.1.047/bin/icc -DHAVE_CONFIG_H -I. -I../opal/include -I../orte/ > include -I../ompi/include -I.. -I/share/apps/intel/cce/9.1.047/ > include -O3 -DNDEBUG -finline-functions -fno-strict-aliasing - > restrict -pthread -MT runtime/ompi_mpi_preconnect.lo -MD -MP -MF > $depbase.Tpo -c -o runtime/ompi_mpi_preconnect.lo runtime/ > ompi_mpi_preconnect.c &&\ > mv -f $depbase.Tpo $depbase.Plo > libtool: compile: /share/apps/intel/cce/9.1.047/bin/icc - > DHAVE_CONFIG_H -I. -I../opal/include -I../orte/include -I../ompi/ > include -I.. -I/share/apps/intel/cce/9.1.047/include -O3 -DNDEBUG - > finline-functions -fno-strict-aliasing -restrict -pthread -MT > runtime/ompi_mpi_preconnect.lo -MD -MP -MF runtime/.deps/ > ompi_mpi_preconnect.Tpo -c runtime/ompi_mpi_preconnect.c -fPIC - > DPIC -o runtime/.libs/ompi_mpi_preconnect.o > libtool: compile: /share/apps/intel/cce/9.1.047/bin/icc - > DHAVE_CONFIG_H -I. -I../opal/include -I../orte/include -I../ompi/ > include -I.. -I/share/apps/intel/cce/9.1.047/include -O3 -DNDEBUG - > finline-functions -fno-strict-aliasing -restrict -pthread -MT > runtime/ompi_mpi_preconnect.lo -MD -MP -MF runtime/.deps/ > ompi_mpi_preconnect.Tpo -c runtime/ompi_mpi_preconnect.c -o runtime/ > ompi_mpi_preconnect.o >/dev/null 2>&1 > depbase=`echo win/win.lo | sed 's|[^/]*$|.deps/&|;s|\.lo$||'`;\ > /bin/sh ../libtool --tag=CC --mode=compile /share/apps/intel/cce/ > 9.1.047/bin/icc -DHAVE_CONFIG_H -I. -I../opal/include -I../orte/ > include -I../ompi/include -I.. -I/share/apps/intel/cce/9.1.047/ > include -O3 -DNDEBUG -finline-functions -fno-strict-aliasing - > restrict -pthread -MT win/win.lo -MD -MP -MF $depbase.Tpo -c -o win/ > win.lo win/win.c &&\ > mv -f $depbase.Tpo $depbase.Plo > libtool: compile: /share/apps/intel/cce/9.1.047/bin/icc - > DHAVE_CONFIG_H -I. -I../opal/include -I../orte/include -I../ompi/ > include -I.. -I/share/apps/intel/cce/9.1.047/include -O3 -DNDEBUG - > finline-functions -fno-strict-aliasing -restrict -pthread -MT win/ > win.lo -MD -MP -MF win/.deps/win.Tpo -c win/win.c -fPIC -DPIC -o > win/.libs/win.o > libtool: compile: /share/apps/intel/cce/9.1.047/bin/icc - > DHAVE_CONFIG_H -I. -I../opal/include -I../orte/include -I../ompi/ > include -I.. -I/share/apps/intel/cce/9.1.047/include -O3 -DNDEBUG - > finline-functions -fno-strict-aliasing -restrict -pthread -MT win/ > win.lo -MD -MP -MF win/.deps/win.Tpo -c win/win.c -o win/win.o >/dev/ > null 2>&1 > /bin/sh ../libtool --tag=CC --mode=link /share/apps/intel/cce/ > 9.1.047/bin/icc -O3 -DNDEBUG -finline-functions -fno-strict- > aliasing -restrict -pthread -export-dynamic -L/share/apps/intel/cce/ > 9.1.047/lib -o libmpi.la -rpath /share/apps/openmpi/intel/ > openmpi-1.2.4-64/lib class/ompi_bitmap.lo class/ompi_free_list.lo > class/ompi_pointer_array.lo class/ompi_rb_tree.lo class/ > ompi_seq_tracker.lo attribute/attribute.lo attribute/ > attribute_predefined.lo communicator/comm_init.lo communicator/ > comm.lo communicator/comm_cid.lo communicator/comm_dyn.lo > communicator/comm_publish.lo errhandler/errhandler.lo errhandler/ > errhandler_invoke.lo errhandler/errhandler_predefined.lo errhandler/ > errcode.lo errhandler/errcode-internal.lo file/file.lo group/ > group.lo group/group_init.lo group/group_set_rank.lo info/info.lo op/ > op.lo op/op_predefined.lo proc/proc.lo request/grequest.lo request/ > request.lo request/req_test.lo request/req_wait.lo runtime/ > ompi_mpi_abort.lo runtime/ompi_mpi_init.lo runtime/ > ompi_mpi_finalize.lo runtime/ompi_mpi_params.lo runtime/ > ompi_mpi_preconnect.lo win/win.lo datatype/libdatatype.la debuggers/ > libdebuggers.la mpi/c/libmpi_c.la mpi/c/profile/libmpi_c_pmpi.la > mpi/f77/libmpi_f77_base.la mca/allocator/libmca_allocator.la mca/ > allocator/bucket/libmca_allocator_bucket.la mca/allocator/basic/ > libmca_allocator_basic.la mca/bml/libmca_bml.la mca/bml/r2/ > libmca_bml_r2.la mca/btl/libmca_btl.la mca/btl/tcp/ > libmca_btl_tcp.la mca/btl/mvapi/libmca_btl_mvapi.la mca/btl/sm/ > libmca_btl_sm.la mca/btl/self/libmca_btl_self.la mca/coll/ > libmca_coll.la mca/coll/tuned/libmca_coll_tuned.la mca/coll/sm/ > libmca_coll_sm.la mca/coll/self/libmca_coll_self.la mca/coll/basic/ > libmca_coll_basic.la mca/common/sm/libmca_common_sm.la mca/io/ > libmca_io.la mca/io/romio/libmca_io_romio.la mca/mpool/ > libmca_mpool.la mca/mpool/sm/libmca_mpool_sm.la mca/mpool/rdma/ > libmca_mpool_rdma.la mca/mtl/libmca_mtl.la mca/osc/libmca_osc.la > mca/osc/pt2pt/libmca_osc_pt2pt.la mca/pml/libmca_pml.la mca/pml/ob1/ > libmca_pml_ob1.la mca/pml/cm/libmca_pml_cm.la mca/rcache/ > libmca_rcache.la mca/rcache/vma/libmca_rcache_vma.la mca/topo/ > libmca_topo.la mca/topo/unity/libmca_topo_unity.la /home/makeuser/ > tmp/openmpi/openmpi-1.2.4_64/openmpi-1.2.4/orte/libopen-rte.la -lnsl > -lutil > libtool: link: /share/apps/intel/cce/9.1.047/bin/icc -shared > class/.libs/ompi_bitmap.o class/.libs/ompi_free_list.o class/.libs/ > ompi_pointer_array.o class/.libs/ompi_rb_tree.o class/.libs/ > ompi_seq_tracker.o attribute/.libs/attribute.o attribute/.libs/ > attribute_predefined.o communicator/.libs/comm_init.o > communicator/.libs/comm.o communicator/.libs/comm_cid.o > communicator/.libs/comm_dyn.o communicator/.libs/comm_publish.o > errhandler/.libs/errhandler.o errhandler/.libs/errhandler_invoke.o > errhandler/.libs/errhandler_predefined.o errhandler/.libs/errcode.o > errhandler/.libs/errcode-internal.o file/.libs/file.o group/.libs/ > group.o group/.libs/group_init.o group/.libs/group_set_rank.o > info/.libs/info.o op/.libs/op.o op/.libs/op_predefined.o proc/.libs/ > proc.o request/.libs/grequest.o request/.libs/request.o > request/.libs/req_test.o request/.libs/req_wait.o runtime/.libs/ > ompi_mpi_abort.o runtime/.libs/ompi_mpi_init.o runtime/.libs/ > ompi_mpi_finalize.o runtime/.libs/ompi_mpi_params.o runtime/.libs/ > ompi_mpi_preconnect.o win/.libs/win.o -Wl,--whole-archive > datatype/.libs/libdatatype.a debuggers/.libs/libdebuggers.a mpi/ > c/.libs/libmpi_c.a mpi/c/profile/.libs/libmpi_c_pmpi.a mpi/f77/.libs/ > libmpi_f77_base.a mca/allocator/.libs/libmca_allocator.a mca/ > allocator/bucket/.libs/libmca_allocator_bucket.a mca/allocator/ > basic/.libs/libmca_allocator_basic.a mca/bml/.libs/libmca_bml.a mca/ > bml/r2/.libs/libmca_bml_r2.a mca/btl/.libs/libmca_btl.a mca/btl/ > tcp/.libs/libmca_btl_tcp.a mca/btl/mvapi/.libs/libmca_btl_mvapi.a > mca/btl/sm/.libs/libmca_btl_sm.a mca/btl/self/.libs/ > libmca_btl_self.a mca/coll/.libs/libmca_coll.a mca/coll/tuned/.libs/ > libmca_coll_tuned.a mca/coll/sm/.libs/libmca_coll_sm.a mca/coll/ > self/.libs/libmca_coll_self.a mca/coll/basic/.libs/ > libmca_coll_basic.a mca/common/sm/.libs/libmca_common_sm_noinst.a > mca/io/.libs/libmca_io.a mca/io/romio/.libs/libmca_io_romio.a mca/ > mpool/.libs/libmca_mpool.a mca/mpool/sm/.libs/libmca_mpool_sm.a mca/ > mpool/rdma/.libs/libmca_mpool_rdma.a mca/mtl/.libs/libmca_mtl.a mca/ > osc/.libs/libmca_osc.a mca/osc/pt2pt/.libs/libmca_osc_pt2pt.a mca/ > pml/.libs/libmca_pml.a mca/pml/ob1/.libs/libmca_pml_ob1.a mca/pml/ > cm/.libs/libmca_pml_cm.a mca/rcache/.libs/libmca_rcache.a mca/rcache/ > vma/.libs/libmca_rcache_vma.a mca/topo/.libs/libmca_topo.a mca/topo/ > unity/.libs/libmca_topo_unity.a -Wl,--no-whole-archive -Wl,-rpath - > Wl,/home/makeuser/tmp/openmpi/openmpi-1.2.4_64/openmpi-1.2.4/ > orte/.libs -Wl,-rpath -Wl,/home/makeuser/tmp/openmpi/ > openmpi-1.2.4_64/openmpi-1.2.4/opal/.libs -Wl,-rpath -Wl,/share/apps/ > openmpi/intel/openmpi-1.2.4-64/lib -L/home/makeuser/tmp/openmpi/ > openmpi-1.2.4_64/openmpi-1.2.4/opal/.libs -L/share/apps/intel/cce/ > 9.1.047/lib -lvapi -lmosal -lrt /home/makeuser/tmp/openmpi/ > openmpi-1.2.4_64/openmpi-1.2.4/orte/.libs/libopen-rte.so /home/ > makeuser/tmp/openmpi/openmpi-1.2.4_64/openmpi-1.2.4/opal/.libs/ > libopen-pal.so -lnuma -ldl -lnsl -lutil -pthread -pthread -Wl,- > soname -Wl,libmpi.so.0 -o .libs/libmpi.so.0.0.0 > IPO link: can not find -lvapi > icc: error: problem during multi-file optimization compilation (code > 1) > make[2]: *** [libmpi.la] Error 1 > make[2]: Leaving directory `/home/makeuser/tmp/openmpi/ > openmpi-1.2.4_64/openmpi-1.2.4/ompi' > make[1]: *** [all-recursive] Error 1 > make[1]: Leaving directory `/home/makeuser/tmp/openmpi/ > openmpi-1.2.4_64/openmpi-1.2.4/ompi' > make: *** [all-recursive] Error 1 > > ----- > Mike Hanby > Information Systems Specialist II > School of Engineering Dean's Office > University of Alabama at Birmingham > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users -- Jeff Squyres Cisco Systems _______________________________________________ users mailing list us...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/users
