Hello,
I'm just compiled open-mpi and tried to run my code which just
measures bandwidth from one node to another. (Code compile fine and
runs under other mpi implementations)
When I did I got this.
uahrcw@c275-6:~/mpi-benchmarks> cat openmpitcp.o15380
c317-6
c317-5
[c317-5:24979] [0,0,2]-[0,0,0] mca_oob_tcp_peer_complete_connect:
connection failed (errno=110) - retrying (pid=24979)
[c317-5:24979] mca_oob_tcp_peer_timer_handler
[c317-5:24997] [0,1,1]-[0,0,0] mca_oob_tcp_peer_complete_connect:
connection failed (errno=110) - retrying (pid=24997)
[c317-5:24997] mca_oob_tcp_peer_timer_handler
[0,1,1][btl_tcp_endpoint.c:559:mca_btl_tcp_endpoint_complete_connect]
connect() failed with errno=110
I compiled open-mpi with Pbspro 5.4-4 and I'm guessing that has
something to do with it.
I've attached my config.log
Any help with this would be appreciated.
uahrcw@c275-6:~/mpi-benchmarks> ompi_info
Open MPI: 1.0.1r8453
Open MPI SVN revision: r8453
Open RTE: 1.0.1r8453
Open RTE SVN revision: r8453
OPAL: 1.0.1r8453
OPAL SVN revision: r8453
Prefix: /opt/asn/apps/openmpi-1.0.1
Configured architecture: x86_64-unknown-linux-gnu
Configured by: asnrcw
Configured on: Fri Feb 24 15:19:37 CST 2006
Configure host: c275-6
Built by: asnrcw
Built on: Fri Feb 24 15:40:09 CST 2006
Built host: c275-6
C bindings: yes
C++ bindings: yes
Fortran77 bindings: yes (all)
Fortran90 bindings: no
C compiler: gcc
C compiler absolute: /usr/bin/gcc
C++ compiler: g++
C++ compiler absolute: /usr/bin/g++
Fortran77 compiler: g77
Fortran77 compiler abs: /usr/bin/g77
Fortran90 compiler: ifort
Fortran90 compiler abs: /opt/asn/intel/fce/9.0/bin/ifort
C profiling: yes
C++ profiling: yes
Fortran77 profiling: yes
Fortran90 profiling: no
C++ exceptions: no
Thread support: posix (mpi: no, progress: no)
Internal debug support: no
MPI parameter check: runtime
Memory profiling support: no
Memory debugging support: no
libltdl support: 1
MCA memory: malloc_hooks (MCA v1.0, API v1.0, Component
v1.0.1)
MCA paffinity: linux (MCA v1.0, API v1.0, Component v1.0.1)
MCA maffinity: first_use (MCA v1.0, API v1.0, Component v1.0.1)
MCA maffinity: libnuma (MCA v1.0, API v1.0, Component v1.0.1)
MCA timer: linux (MCA v1.0, API v1.0, Component v1.0.1)
MCA allocator: basic (MCA v1.0, API v1.0, Component v1.0)
MCA allocator: bucket (MCA v1.0, API v1.0, Component v1.0)
MCA coll: basic (MCA v1.0, API v1.0, Component v1.0.1)
MCA coll: self (MCA v1.0, API v1.0, Component v1.0.1)
MCA coll: sm (MCA v1.0, API v1.0, Component v1.0.1)
MCA io: romio (MCA v1.0, API v1.0, Component v1.0.1)
MCA mpool: sm (MCA v1.0, API v1.0, Component v1.0.1)
MCA pml: ob1 (MCA v1.0, API v1.0, Component v1.0.1)
MCA pml: teg (MCA v1.0, API v1.0, Component v1.0.1)
MCA ptl: self (MCA v1.0, API v1.0, Component v1.0.1)
MCA ptl: sm (MCA v1.0, API v1.0, Component v1.0.1)
MCA ptl: tcp (MCA v1.0, API v1.0, Component v1.0.1)
MCA btl: self (MCA v1.0, API v1.0, Component v1.0.1)
MCA btl: sm (MCA v1.0, API v1.0, Component v1.0.1)
MCA btl: tcp (MCA v1.0, API v1.0, Component v1.0)
MCA topo: unity (MCA v1.0, API v1.0, Component v1.0.1)
MCA gpr: null (MCA v1.0, API v1.0, Component v1.0.1)
MCA gpr: proxy (MCA v1.0, API v1.0, Component v1.0.1)
MCA gpr: replica (MCA v1.0, API v1.0, Component v1.0.1)
MCA iof: proxy (MCA v1.0, API v1.0, Component v1.0.1)
MCA iof: svc (MCA v1.0, API v1.0, Component v1.0.1)
MCA ns: proxy (MCA v1.0, API v1.0, Component v1.0.1)
MCA ns: replica (MCA v1.0, API v1.0, Component v1.0.1)
MCA oob: tcp (MCA v1.0, API v1.0, Component v1.0)
MCA ras: dash_host (MCA v1.0, API v1.0, Component v1.0.1)
MCA ras: hostfile (MCA v1.0, API v1.0, Component v1.0.1)
MCA ras: localhost (MCA v1.0, API v1.0, Component v1.0.1)
MCA ras: slurm (MCA v1.0, API v1.0, Component v1.0.1)
MCA ras: tm (MCA v1.0, API v1.0, Component v1.0.1)
MCA rds: hostfile (MCA v1.0, API v1.0, Component v1.0.1)
MCA rds: resfile (MCA v1.0, API v1.0, Component v1.0.1)
MCA rmaps: round_robin (MCA v1.0, API v1.0, Component v1.0.1)
MCA rmgr: proxy (MCA v1.0, API v1.0, Component v1.0.1)
MCA rmgr: urm (MCA v1.0, API v1.0, Component v1.0.1)
MCA rml: oob (MCA v1.0, API v1.0, Component v1.0.1)
MCA pls: daemon (MCA v1.0, API v1.0, Component v1.0.1)
MCA pls: proxy (MCA v1.0, API v1.0, Component v1.0.1)
MCA pls: fork (MCA v1.0, API v1.0, Component v1.0.1)
MCA pls: rsh (MCA v1.0, API v1.0, Component v1.0.1)
MCA pls: slurm (MCA v1.0, API v1.0, Component v1.0.1)
MCA pls: tm (MCA v1.0, API v1.0, Component v1.0.1)
MCA sds: env (MCA v1.0, API v1.0, Component v1.0.1)
MCA sds: seed (MCA v1.0, API v1.0, Component v1.0.1)
MCA sds: singleton (MCA v1.0, API v1.0, Component v1.0.1)
MCA sds: slurm (MCA v1.0, API v1.0, Component v1.0.1)
MCA sds: pipe (MCA v1.0, API v1.0, Component v1.0.1)
uahrcw@c275-6:~/mpi-benchmarks>
--
Charles Wright, HPC Systems Administrator
Alabama Research and Education Network
Computer Sciences Corporation
config.log.bz2
Description: BZip2 compressed data
