Can you check the limits that are set in the sge_execd and sge_shepherd processes (/proc/<pid>/limits)? It's possible that the user who ran the execd init script had limits applied, which would carry over to the execd process.
On Wed, Jul 03, 2019 at 12:36:00PM +1000, Derrick Lin wrote: > Hi guys, > > We have custom settings for user open files in /etc/security/limits.conf in > all Compute Node. When checking if the configuration is effective with > "ulimit -a" by SSH to each node, it reflects the correct settings. > > but when ran the same command through SGE (both qsub and qrsh), we found > that some Compute Nodes do not reflects the correct settings but the rest > are fine. > > I am wondering if this is SGE related? And idea is welcomed. > > Cheers, > Derrick > _______________________________________________ > users mailing list > users@gridengine.org > https://gridengine.org/mailman/listinfo/users -- -- Skylar Thompson (skyl...@u.washington.edu) -- Genome Sciences Department, System Administrator -- Foege Building S046, (206)-685-7354 -- University of Washington School of Medicine _______________________________________________ users mailing list users@gridengine.org https://gridengine.org/mailman/listinfo/users
