I looks like an openmpi error. Check this link : http://www.open-mpi.org/faq/?category=openfabrics#ib-locked-pages
On Thu, Mar 15, 2012 at 1:11 PM, Reuti <[email protected]> wrote: > Am 15.03.2012 um 11:30 schrieb Mohamed Adel: > > > Dear all, > > > > I was trying to run a simple mpi script via qsub, then I received the > error below after which the job run correctly! > > I received no error when I tried to run the same script directly without > qsub. > > Is there a way to fix this error message? > > To me it doesn't look like error messages from SGE. You could avoid "#$ -j > y" and they should end up in a separate file. > > > Thanks in advance, > > madel > > > > job script: > > #$ -cwd > > #$ -j y > > #$ -N hello-mpi > > #$ -o $JOB_NAME.o$JOB_ID > > #$ -pe impi 16 > > mpirun --rsh=ssh -np 16 ./hello.bin > > Are you using a tight integration, or is it an SSH startup outside of > SGE's control? > > -- Reuti > > > > ============================================ > > > > Error Message: > > libibverbs: Warning: RLIMIT_MEMLOCK is 32768 bytes. > > This will severely limit memory registrations. > > libibverbs: Warning: RLIMIT_MEMLOCK is 32768 bytes. > > This will severely limit memory registrations. > > libibverbs: Warning: RLIMIT_MEMLOCK is 32768 bytes. > > This will severely limit memory registrations. > > libibverbs: Warning: RLIMIT_MEMLOCK is 32768 bytes. > > This will severely limit memory registrations. > > libibverbs: Warning: RLIMIT_MEMLOCK is 32768 bytes. > > This will severely limit memory registrations. > > libibverbs: Warning: RLIMIT_MEMLOCK is 32768 bytes. > > This will severely limit memory registrations. > > libibverbs: Warning: RLIMIT_MEMLOCK is 32768 bytes. > > This will severely limit memory registrations. > > libibverbs: Warning: RLIMIT_MEMLOCK is 32768 bytes. > > This will severely limit memory registrations. > > comp040.local:5827: create_cq Cannot allocate memory > > comp040.local:5826: create_cq Cannot allocate memory > > comp040.local:5829: create_cq Cannot allocate memory > > comp040.local:5833: create_cq Cannot allocate memory > > comp040.local:5828: create_cq Cannot allocate memory > > comp040.local:5831: create_cq Cannot allocate memory > > comp040.local:5832: create_cq Cannot allocate memory > > comp040.local:5830: create_cq Cannot allocate memory > > comp040.local:5832: open_hca: getaddr_netdev ERROR: No such file or > directory. Is ib1 configured? > > comp040.local:5832: dapls_ib_open_hca failed 120000 > > comp040.local:5827: open_hca: getaddr_netdev ERROR: No such file or > directory. Is ib1 configured? > > comp040.local:5827: dapls_ib_open_hca failed 120000 > > comp040.local:5832: open_hca: getaddr_netdev ERROR: No such device. Is > ib2 configured? > > comp040.local:5832: dapls_ib_open_hca failed 120000 > > comp040.local:5829: open_hca: getaddr_netdev ERROR: No such file or > directory. Is ib1 configured? > > comp040.local:5829: dapls_ib_open_hca failed 120000 > > comp040.local:5827: open_hca: getaddr_netdev ERROR: No such device. Is > ib2 configured? > > comp040.local:5827: dapls_ib_open_hca failed 120000 > > comp040.local:5832: open_hca: getaddr_netdev ERROR: No such device. Is > ib3 configured? > > comp040.local:5832: dapls_ib_open_hca failed 120000 > > comp040.local:5829: open_hca: getaddr_netdev ERROR: No such device. Is > ib2 configured? > > comp040.local:5829: dapls_ib_open_hca failed 120000 > > comp040.local:5826: open_hca: getaddr_netdev ERROR: No such file or > directory. Is ib1 configured? > > comp040.local:5826: dapls_ib_open_hca failed 120000 > > comp040.local:5827: open_hca: getaddr_netdev ERROR: No such device. Is > ib3 configured? > > comp040.local:5827: dapls_ib_open_hca failed 120000 > > comp040.local:5828: open_hca: getaddr_netdev ERROR: No such file or > directory. Is ib1 configured? > > comp040.local:5828: comp040.local:5832: open_hca: getaddr_netdev ERROR: > No such device. Is bond0 configured? > > comp040.local:5832: dapls_ib_open_hca failed 120000 > > dapls_ib_open_hca failed 120000 > > comp040.local:5829: open_hca: getaddr_netdev ERROR: No such device. Is > ib3 configured? > > comp040.local:5829: dapls_ib_open_hca failed 120000 > > comp040.local:5826: open_hca: getaddr_netdev ERROR: No such device. Is > ib2 configured? > > comp040.local:5826: dapls_ib_open_hca failed 120000 > > comp040.local:5833: open_hca: getaddr_netdev ERROR: No such file or > directory. Is ib1 configured? > > comp040.local:5833: dapls_ib_open_hca failed 120000 > > comp040.local:5831: open_hca: getaddr_netdev ERROR: No such file or > directory. Is ib1 configured? > > comp040.local:5831: dapls_ib_open_hca failed 120000 > > comp040.local:5827: open_hca: getaddr_netdev ERROR: No such device. Is > bond0 configured? > > comp040.local:5827: dapls_ib_open_hca failed 120000 > > comp040.local:5830: open_hca: getaddr_netdev ERROR: No such file or > directory. Is ib1 configured? > > comp040.local:5830: dapls_ib_open_hca failed 120000 > > comp040.local:5833: open_hca: getaddr_netdev ERROR: No such device. Is > ib2 configured? > > comp040.local:5833: dapls_ib_open_hca failed 120000 > > comp040.local:5829: open_hca: getaddr_netdev ERROR: No such device. Is > bond0 configured? > > comp040.local:5829: dapls_ib_open_hca failed 120000 > > comp040.local:5826: open_hca: getaddr_netdev ERROR: No such device. Is > ib3 configured? > > comp040.local:5826: dapls_ib_open_hca failed 120000 > > comp040.local:5828: open_hca: getaddr_netdev ERROR: No such device. Is > ib2 configured? > > comp040.local:5828: dapls_ib_open_hca failed 120000 > > comp040.local:5831: open_hca: getaddr_netdev ERROR: No such device. Is > ib2 configured? > > comp040.local:5831: dapls_ib_open_hca failed 120000 > > comp040.local:5833: open_hca: getaddr_netdev ERROR: No such device. Is > ib3 configured? > > comp040.local:5833: dapls_ib_open_hca failed 120000 > > comp040.local:5830: open_hca: getaddr_netdev ERROR: No such device. Is > ib2 configured? > > comp040.local:5830: dapls_ib_open_hca failed 120000 > > comp040.local:5826: open_hca: getaddr_netdev ERROR: No such device. Is > bond0 configured? > > comp040.local:5826: dapls_ib_open_hca failed 120000 > > comp040.local:5828: open_hca: getaddr_netdev ERROR: No such device. Is > ib3 configured? > > comp040.local:5828: dapls_ib_open_hca failed 120000 > > comp040.local:5831: open_hca: getaddr_netdev ERROR: No such device. Is > ib3 configured? > > comp040.local:5831: dapls_ib_open_hca failed 120000 > > comp040.local:5833: open_hca: getaddr_netdev ERROR: No such device. Is > bond0 configured? > > comp040.local:5833: dapls_ib_open_hca failed 120000 > > comp040.local:5828: open_hca: getaddr_netdev ERROR: No such device. Is > bond0 configured? > > comp040.local:5828: dapls_ib_open_hca failed 120000 > > comp040.local:5831: open_hca: getaddr_netdev ERROR: No such device. Is > bond0 configured? > > comp040.local:5831: dapls_ib_open_hca failed 120000 > > comp040.local:5830: open_hca: getaddr_netdev ERROR: No such device. Is > ib3 configured? > > comp040.local:5830: dapls_ib_open_hca failed 120000 > > comp040.local:5830: open_hca: getaddr_netdev ERROR: No such device. Is > bond0 configured? > > comp040.local:5830: dapls_ib_open_hca failed 120000 > > Hello world: rank 8 of 16 running on comp047.local > > Hello world: rank 13 of 16 running on comp047.local > > Hello world: rank 10 of 16 running on comp047.local > > Hello world: rank 11 of 16 running on comp047.local > > Hello world: rank 15 of 16 running on comp047.local > > Hello world: rank 9 of 16 running on comp047.local > > Hello world: rank 12 of 16 running on comp047.local > > Hello world: rank 7 of 16 running on comp040.local > > Hello world: rank 14 of 16 running on comp047.local > > Hello world: rank 6 of 16 running on comp040.local > > Hello world: rank 0 of 16 running on comp040.local > > Hello world: rank 4 of 16 running on comp040.local > > Hello world: rank 2 of 16 running on comp040.local > > Hello world: rank 5 of 16 running on comp040.local > > Hello world: rank 1 of 16 running on comp040.local > > Hello world: rank 3 of 16 running on comp040.local > > > > _______________________________________________ > > users mailing list > > [email protected] > > https://gridengine.org/mailman/listinfo/users > > > _______________________________________________ > users mailing list > [email protected] > https://gridengine.org/mailman/listinfo/users >
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