Is this a limit of spark shuffle block currently? On Tue, May 3, 2016 at 11:18 AM, Nirav Patel <npa...@xactlycorp.com> wrote:
> Hi, > > My spark application getting killed abruptly during a groupBy operation > where shuffle happens. All shuffle happens with PROCESS_LOCAL locality. I > see following in driver logs. Should not this logs be in executors? Anyhow > looks like ByteBuffer is running out of memory. What will be workaround for > this? > > > 2016-05-02 22:38:53,595 INFO > [sparkDriver-akka.actor.default-dispatcher-14] > org.apache.spark.MapOutputTrackerMasterEndpoint: Asked to send map output > locations for shuffle 3 to hdn2.mycorp:45993 > 2016-05-02 22:38:53,832 INFO > [sparkDriver-akka.actor.default-dispatcher-14] > org.apache.spark.storage.BlockManagerInfo: Removed broadcast_4_piece0 on > 10.250.70.117:52328 in memory (size: 2.1 KB, free: 15.5 MB) > 2016-05-02 22:39:03,704 WARN [New I/O worker #5] > org.jboss.netty.channel.DefaultChannelPipeline: An exception was thrown by > a user handler while handling an exception event ([id: 0xa8147f0c, / > 10.250.70.110:48056 => /10.250.70.117:38300] EXCEPTION: > java.lang.OutOfMemoryError: Java heap space) > java.lang.OutOfMemoryError: Java heap space > at java.nio.HeapByteBuffer.<init>(HeapByteBuffer.java:57) > at java.nio.ByteBuffer.allocate(ByteBuffer.java:331) > at > org.jboss.netty.buffer.CompositeChannelBuffer.toByteBuffer(CompositeChannelBuffer.java:649) > at > org.jboss.netty.buffer.AbstractChannelBuffer.toByteBuffer(AbstractChannelBuffer.java:530) > at > org.jboss.netty.channel.socket.nio.SocketSendBufferPool.acquire(SocketSendBufferPool.java:77) > at > org.jboss.netty.channel.socket.nio.SocketSendBufferPool.acquire(SocketSendBufferPool.java:46) > at > org.jboss.netty.channel.socket.nio.AbstractNioWorker.write0(AbstractNioWorker.java:194) > at > org.jboss.netty.channel.socket.nio.AbstractNioWorker.writeFromTaskLoop(AbstractNioWorker.java:152) > at > org.jboss.netty.channel.socket.nio.AbstractNioChannel$WriteTask.run(AbstractNioChannel.java:335) > at > org.jboss.netty.channel.socket.nio.AbstractNioSelector.processTaskQueue(AbstractNioSelector.java:366) > at > org.jboss.netty.channel.socket.nio.AbstractNioSelector.run(AbstractNioSelector.java:290) > at > org.jboss.netty.channel.socket.nio.AbstractNioWorker.run(AbstractNioWorker.java:90) > at > org.jboss.netty.channel.socket.nio.NioWorker.run(NioWorker.java:178) > at > java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145) > at > java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615) > at java.lang.Thread.run(Thread.java:744) > 2016-05-02 22:39:05,783 ERROR > [sparkDriver-akka.actor.default-dispatcher-14] > org.apache.spark.rpc.akka.ErrorMonitor: Uncaught fatal error from thread > [sparkDriver-akka.remote.default-remote-dispatcher-5] shutting down > ActorSystem [sparkDriver] > java.lang.OutOfMemoryError: Java heap space > at java.util.Arrays.copyOf(Arrays.java:2271) > at > java.io.ByteArrayOutputStream.grow(ByteArrayOutputStream.java:113) > at > java.io.ByteArrayOutputStream.ensureCapacity(ByteArrayOutputStream.java:93) > at > java.io.ByteArrayOutputStream.write(ByteArrayOutputStream.java:140) > at > java.io.ObjectOutputStream$BlockDataOutputStream.drain(ObjectOutputStream.java:1876) > at > java.io.ObjectOutputStream$BlockDataOutputStream.setBlockDataMode(ObjectOutputStream.java:1785) > at > java.io.ObjectOutputStream.writeObject0(ObjectOutputStream.java:1188) > at > java.io.ObjectOutputStream.writeObject(ObjectOutputStream.java:347) > at > akka.serialization.JavaSerializer$$anonfun$toBinary$1.apply$mcV$sp(Serializer.scala:129) > at > akka.serialization.JavaSerializer$$anonfun$toBinary$1.apply(Serializer.scala:129) > at > akka.serialization.JavaSerializer$$anonfun$toBinary$1.apply(Serializer.scala:129) > at scala.util.DynamicVariable.withValue(DynamicVariable.scala:57) > at akka.serialization.JavaSerializer.toBinary(Serializer.scala:129) > at > akka.remote.MessageSerializer$.serialize(MessageSerializer.scala:36) > at > akka.remote.EndpointWriter$$anonfun$serializeMessage$1.apply(Endpoint.scala:843) > at > akka.remote.EndpointWriter$$anonfun$serializeMessage$1.apply(Endpoint.scala:843) > at scala.util.DynamicVariable.withValue(DynamicVariable.scala:57) > at akka.remote.EndpointWriter.serializeMessage(Endpoint.scala:842) > at akka.remote.EndpointWriter.writeSend(Endpoint.scala:743) > at > akka.remote.EndpointWriter$$anonfun$2.applyOrElse(Endpoint.scala:718) > at akka.actor.Actor$class.aroundReceive(Actor.scala:467) > at akka.remote.EndpointActor.aroundReceive(Endpoint.scala:411) > at akka.actor.ActorCell.receiveMessage(ActorCell.scala:516) > at akka.actor.ActorCell.invoke(ActorCell.scala:487) > at akka.dispatch.Mailbox.processMailbox(Mailbox.scala:238) > at akka.dispatch.Mailbox.run(Mailbox.scala:220) > at > akka.dispatch.ForkJoinExecutorConfigurator$AkkaForkJoinTask.exec(AbstractDispatcher.scala:397) > at > scala.concurrent.forkjoin.ForkJoinTask.doExec(ForkJoinTask.java:260) > at > scala.concurrent.forkjoin.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1339) > at > scala.concurrent.forkjoin.ForkJoinPool.runWorker(ForkJoinPool.java:1979) > at > scala.concurrent.forkjoin.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:107) > 2016-05-02 22:39:05,783 ERROR > [sparkDriver-akka.actor.default-dispatcher-2] akka.actor.ActorSystemImpl: > Uncaught fatal error from thread > [sparkDriver-akka.remote.default-remote-dispatcher-5] shutting down > ActorSystem [sparkDriver] > java.lang.OutOfMemoryError: Java heap space > at java.util.Arrays.copyOf(Arrays.java:2271) > at > java.io.ByteArrayOutputStream.grow(ByteArrayOutputStream.java:113) > at > java.io.ByteArrayOutputStream.ensureCapacity(ByteArrayOutputStream.java:93) > at > java.io.ByteArrayOutputStream.write(ByteArrayOutputStream.java:140) > at > java.io.ObjectOutputStream$BlockDataOutputStream.drain(ObjectOutputStream.java:1876) > at > java.io.ObjectOutputStream$BlockDataOutputStream.setBlockDataMode(ObjectOutputStream.java:1785) > at > java.io.ObjectOutputStream.writeObject0(ObjectOutputStream.java:1188) > at > java.io.ObjectOutputStream.writeObject(ObjectOutputStream.java:347) > at > akka.serialization.JavaSerializer$$anonfun$toBinary$1.apply$mcV$sp(Serializer.scala:129) > at > akka.serialization.JavaSerializer$$anonfun$toBinary$1.apply(Serializer.scala:129) > > > > 67247,1 99% > > -- [image: What's New with Xactly] <http://www.xactlycorp.com/email-click/> <https://www.nyse.com/quote/XNYS:XTLY> [image: LinkedIn] <https://www.linkedin.com/company/xactly-corporation> [image: Twitter] <https://twitter.com/Xactly> [image: Facebook] <https://www.facebook.com/XactlyCorp> [image: YouTube] <http://www.youtube.com/xactlycorporation>
