The class path formations on driver and executors are different.

Cheers

On Fri, Jan 22, 2016 at 3:25 PM, Ajinkya Kale <kaleajin...@gmail.com> wrote:

> Is this issue only when the computations are in distributed mode ?
> If I do (pseudo code) :
> rdd.collect.call_to_hbase  I dont get this error,
>
> but if I do :
> rdd.call_to_hbase.collect it throws this error.
>
> On Wed, Jan 20, 2016 at 6:50 PM Ajinkya Kale <kaleajin...@gmail.com>
> wrote:
>
>> Unfortunately I cannot at this moment (not a decision I can make) :(
>>
>> On Wed, Jan 20, 2016 at 6:46 PM Ted Yu <yuzhih...@gmail.com> wrote:
>>
>>> I am not aware of a workaround.
>>>
>>> Can you upgrade to 0.98.4+ release ?
>>>
>>> Cheers
>>>
>>> On Wed, Jan 20, 2016 at 6:26 PM, Ajinkya Kale <kaleajin...@gmail.com>
>>> wrote:
>>>
>>>> Hi Ted,
>>>>
>>>> Thanks for responding.
>>>> Is there a work around for 0.98.0 ? Adding the hbase-protocol jar to
>>>> HADOOP_CLASSPATH didnt work for me.
>>>>
>>>> On Wed, Jan 20, 2016 at 6:14 PM Ted Yu <yuzhih...@gmail.com> wrote:
>>>>
>>>>> 0.98.0 didn't have fix from HBASE-11118
>>>>>
>>>>> Please upgrade your hbase version and try again.
>>>>>
>>>>> If still there is problem, please pastebin the stack trace.
>>>>>
>>>>> Thanks
>>>>>
>>>>> On Wed, Jan 20, 2016 at 5:41 PM, Ajinkya Kale <kaleajin...@gmail.com>
>>>>> wrote:
>>>>>
>>>>>>
>>>>>> I have posted this on hbase user list but i thought makes more sense
>>>>>> on spark user list.
>>>>>> I am able to read the table in yarn-client mode from spark-shell but
>>>>>> I have exhausted all online forums for options to get it working in the
>>>>>> yarn-cluster mode through spark-submit.
>>>>>>
>>>>>> I am using this code-example
>>>>>> http://www.vidyasource.com/blog/Programming/Scala/Java/Data/Hadoop/Analytics/2014/01/25/lighting-a-spark-with-hbase
>>>>>>  to
>>>>>> read a hbase table using Spark with the only change of adding the
>>>>>> hbase.zookeeper.quorum through code as it is not picking it from the
>>>>>> hbase-site.xml.
>>>>>>
>>>>>> Spark 1.5.3
>>>>>>
>>>>>> HBase 0.98.0
>>>>>>
>>>>>>
>>>>>> Facing this error -
>>>>>>
>>>>>>  16/01/20 12:56:59 WARN 
>>>>>> client.ConnectionManager$HConnectionImplementation: Encountered problems 
>>>>>> when prefetch hbase:meta table:
>>>>>> org.apache.hadoop.hbase.client.RetriesExhaustedException: Failed after 
>>>>>> attempts=3, exceptions:Wed Jan 20 12:56:58 GMT-07:00 2016, 
>>>>>> org.apache.hadoop.hbase.client.RpcRetryingCaller@111585e, 
>>>>>> java.lang.IllegalAccessError: class 
>>>>>> com.google.protobuf.HBaseZeroCopyByteString cannot access its superclass 
>>>>>> com.google.protobuf.LiteralByteStringWed Jan 20 12:56:58 GMT-07:00 2016, 
>>>>>> org.apache.hadoop.hbase.client.RpcRetryingCaller@111585e, 
>>>>>> java.lang.IllegalAccessError: 
>>>>>> com/google/protobuf/HBaseZeroCopyByteStringWed Jan 20 12:56:59 GMT-07:00 
>>>>>> 2016, org.apache.hadoop.hbase.client.RpcRetryingCaller@111585e, 
>>>>>> java.lang.IllegalAccessError: com/google/protobuf/HBaseZeroCopyByteString
>>>>>>
>>>>>>     at 
>>>>>> org.apache.hadoop.hbase.client.RpcRetryingCaller.callWithRetries(RpcRetryingCaller.java:136)
>>>>>>     at 
>>>>>> org.apache.hadoop.hbase.client.HTable.getRowOrBefore(HTable.java:751)
>>>>>>     at 
>>>>>> org.apache.hadoop.hbase.client.MetaScanner.metaScan(MetaScanner.java:147)
>>>>>>     at 
>>>>>> org.apache.hadoop.hbase.client.ConnectionManager$HConnectionImplementation.prefetchRegionCache(ConnectionManager.java:1215)
>>>>>>     at 
>>>>>> org.apache.hadoop.hbase.client.ConnectionManager$HConnectionImplementation.locateRegionInMeta(ConnectionManager.java:1280)
>>>>>>     at 
>>>>>> org.apache.hadoop.hbase.client.ConnectionManager$HConnectionImplementation.locateRegion(ConnectionManager.java:1128)
>>>>>>     at 
>>>>>> org.apache.hadoop.hbase.client.ConnectionManager$HConnectionImplementation.locateRegion(ConnectionManager.java:1111)
>>>>>>     at 
>>>>>> org.apache.hadoop.hbase.client.ConnectionManager$HConnectionImplementation.locateRegion(ConnectionManager.java:1070)
>>>>>>     at org.apache.hadoop.hbase.client.HTable.finishSetup(HTable.java:347)
>>>>>>     at org.apache.hadoop.hbase.client.HTable.<init>(HTable.java:201)
>>>>>>     at org.apache.hadoop.hbase.client.HTable.<init>(HTable.java:159)
>>>>>>     at 
>>>>>> org.apache.hadoop.hbase.mapreduce.TableInputFormat.setConf(TableInputFormat.java:101)
>>>>>>     at 
>>>>>> org.apache.spark.rdd.NewHadoopRDD.getPartitions(NewHadoopRDD.scala:111)
>>>>>>     at 
>>>>>> org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:239)
>>>>>>     at 
>>>>>> org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:237)
>>>>>>     at scala.Option.getOrElse(Option.scala:120)
>>>>>>     at org.apache.spark.rdd.RDD.partitions(RDD.scala:237)
>>>>>>     at org.apache.spark.rdd.RDD$$anonfun$take$1.apply(RDD.scala:1281)
>>>>>>     at 
>>>>>> org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:147)
>>>>>>     at 
>>>>>> org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:108)
>>>>>>     at org.apache.spark.rdd.RDD.withScope(RDD.scala:310)
>>>>>>     at org.apache.spark.rdd.RDD.take(RDD.scala:1276)
>>>>>>
>>>>>> I tried adding the hbase protocol jar on spar-defaults.conf and in
>>>>>> the driver-classpath as suggested here
>>>>>> http://apache-spark-user-list.1001560.n3.nabble.com/java-lang-IllegalAccessError-class-com-google-protobuf-HBaseZeroCopyByteString-cannot-access-its-supg-td24303.html
>>>>>>  but
>>>>>> no success.
>>>>>> Any suggestions ?
>>>>>>
>>>>>>
>>>>>
>>>

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