That particular class you did find is under parquet/... which means it was shaded. Did you build your application against a hadoop2.6 dependency? The maven central repo only has 2.2 but HDP has its own repos.
On Thu, Mar 5, 2015 at 10:04 AM, Todd Nist <tsind...@gmail.com> wrote: > I am running Spark on a HortonWorks HDP Cluster. I have deployed there > prebuilt version but it is only for Spark 1.2.0 not 1.2.1 and there are a > few fixes and features in there that I would like to leverage. > > I just downloaded the spark-1.2.1 source and built it to support Hadoop > 2.6 by doing the following: > > radtech:spark-1.2.1 tnist$ ./make-distribution.sh --name hadoop2.6 --tgz > -Pyarn -Phadoop-2.4 -Dhadoop.version=2.6.0 -Phive -Phive-thriftserver > -DskipTests clean package > > When I deploy this to my hadoop cluster and kick of a spark-shell, > > $> spark-1.2.1-bin-hadoop2.6]# ./bin/spark-shell --master yarn-client > --driver-memory 512m --executor-memory 512m > > Results in java.lang.NoClassDefFoundError: > org/codehaus/jackson/map/deser/std/StdDeserializer > > The full stack trace is below. I have validate that the > $SPARK_HOME/lib/spark-assembly-1.2.1-hadoop2.6.0.jar does infact contain > the class in question: > > jar -tvf spark-assembly-1.2.1-hadoop2.6.0.jar | grep > 'org/codehaus/jackson/map/deser/std' > ... > 18002 Thu Mar 05 11:23:04 EST 2015 > parquet/org/codehaus/jackson/map/deser/std/StdDeserializer.class > 1584 Thu Mar 05 11:23:04 EST 2015 > parquet/org/codehaus/jackson/map/deser/std/StdKeyDeserializer$BoolKD.class... > > Any guidance on what I missed ? If i start the spark-shell in standalone > it comes up fine, $SPARK_HOME/bin/spark-shell so it looks to be related > to starting it under yarn from what I can tell. > > TIA for the assistance. > > -Todd > Stack Trace > > 15/03/05 12:12:38 INFO spark.SecurityManager: Changing view acls to: > root15/03/05 12:12:38 INFO spark.SecurityManager: Changing modify acls to: > root15/03/05 12:12:38 INFO spark.SecurityManager: SecurityManager: > authentication disabled; ui acls disabled; users with view permissions: > Set(root); users with modify permissions: Set(root)15/03/05 12:12:38 INFO > spark.HttpServer: Starting HTTP Server15/03/05 12:12:39 INFO server.Server: > jetty-8.y.z-SNAPSHOT15/03/05 12:12:39 INFO server.AbstractConnector: Started > SocketConnector@0.0.0.0:3617615/03/05 12:12:39 INFO util.Utils: Successfully > started service 'HTTP class server' on port 36176. > Welcome to > ____ __ > / __/__ ___ _____/ /__ > _\ \/ _ \/ _ `/ __/ '_/ > /___/ .__/\_,_/_/ /_/\_\ version 1.2.1 > /_/ > > Using Scala version 2.10.4 (OpenJDK 64-Bit Server VM, Java 1.7.0_75) > Type in expressions to have them evaluated. > Type :help for more information.15/03/05 12:12:43 INFO spark.SecurityManager: > Changing view acls to: root15/03/05 12:12:43 INFO spark.SecurityManager: > Changing modify acls to: root15/03/05 12:12:43 INFO spark.SecurityManager: > SecurityManager: authentication disabled; ui acls disabled; users with view > permissions: Set(root); users with modify permissions: Set(root)15/03/05 > 12:12:44 INFO slf4j.Slf4jLogger: Slf4jLogger started15/03/05 12:12:44 INFO > Remoting: Starting remoting15/03/05 12:12:44 INFO Remoting: Remoting started; > listening on addresses > :[akka.tcp://sparkdri...@hadoopdev01.opsdatastore.com:50544]15/03/05 12:12:44 > INFO util.Utils: Successfully started service 'sparkDriver' on port > 50544.15/03/05 12:12:44 INFO spark.SparkEnv: Registering > MapOutputTracker15/03/05 12:12:44 INFO spark.SparkEnv: Registering > BlockManagerMaster15/03/05 12:12:44 INFO storage.DiskBlockManager: Created > local directory at > /tmp/spark-16402794-cc1e-42d0-9f9c-99f15eaa1861/spark-118bc6af-4008-45d7-a22f-491bcd1856c015/03/05 > 12:12:44 INFO storage.MemoryStore: MemoryStore started with capacity 265.4 > MB15/03/05 12:12:45 WARN util.NativeCodeLoader: Unable to load native-hadoop > library for your platform... using builtin-java classes where > applicable15/03/05 12:12:45 INFO spark.HttpFileServer: HTTP File server > directory is > /tmp/spark-5d7da34c-58d4-4d60-9b6a-3dce43cab39e/spark-4d65aacb-78bd-40fd-b6c0-53b47e28819915/03/05 > 12:12:45 INFO spark.HttpServer: Starting HTTP Server15/03/05 12:12:45 INFO > server.Server: jetty-8.y.z-SNAPSHOT15/03/05 12:12:45 INFO > server.AbstractConnector: Started SocketConnector@0.0.0.0:5645215/03/05 > 12:12:45 INFO util.Utils: Successfully started service 'HTTP file server' on > port 56452.15/03/05 12:12:45 INFO server.Server: jetty-8.y.z-SNAPSHOT15/03/05 > 12:12:45 INFO server.AbstractConnector: Started > SelectChannelConnector@0.0.0.0:404015/03/05 12:12:45 INFO util.Utils: > Successfully started service 'SparkUI' on port 4040.15/03/05 12:12:45 INFO > ui.SparkUI: Started SparkUI at > http://hadoopdev01.opsdatastore.com:404015/03/05 12:12:46 INFO > impl.TimelineClientImpl: Timeline service address: > http://hadoopdev02.opsdatastore.com:8188/ws/v1/timeline/ > java.lang.NoClassDefFoundError: > org/codehaus/jackson/map/deser/std/StdDeserializer > at java.lang.ClassLoader.defineClass1(Native Method) > at java.lang.ClassLoader.defineClass(ClassLoader.java:800) > at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142) > at java.net.URLClassLoader.defineClass(URLClassLoader.java:449) > at java.net.URLClassLoader.access$100(URLClassLoader.java:71) > at java.net.URLClassLoader$1.run(URLClassLoader.java:361) > at java.net.URLClassLoader$1.run(URLClassLoader.java:355) > at java.security.AccessController.doPrivileged(Native Method) > at java.net.URLClassLoader.findClass(URLClassLoader.java:354) > at java.lang.ClassLoader.loadClass(ClassLoader.java:425) > at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:308) > at java.lang.ClassLoader.loadClass(ClassLoader.java:358) > at > org.apache.hadoop.yarn.webapp.YarnJacksonJaxbJsonProvider.configObjectMapper(YarnJacksonJaxbJsonProvider.java:57) > at > org.apache.hadoop.yarn.util.timeline.TimelineUtils.<clinit>(TimelineUtils.java:47) > at > org.apache.hadoop.yarn.client.api.impl.YarnClientImpl.serviceInit(YarnClientImpl.java:166) > at > org.apache.hadoop.service.AbstractService.init(AbstractService.java:163) > at org.apache.spark.deploy.yarn.Client.submitApplication(Client.scala:65) > at > org.apache.spark.scheduler.cluster.YarnClientSchedulerBackend.start(YarnClientSchedulerBackend.scala:57) > at > org.apache.spark.scheduler.TaskSchedulerImpl.start(TaskSchedulerImpl.scala:140) > at org.apache.spark.SparkContext.<init>(SparkContext.scala:348) > at > org.apache.spark.repl.SparkILoop.createSparkContext(SparkILoop.scala:986) > at $iwC$$iwC.<init>(<console>:9) > at $iwC.<init>(<console>:18) > at <init>(<console>:20) > at .<init>(<console>:24) > at .<clinit>(<console>) > at .<init>(<console>:7) > at .<clinit>(<console>) > at $print(<console>) > at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) > at > sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) > at > sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) > at java.lang.reflect.Method.invoke(Method.java:606) > at > org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:852) > at > org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1125) > at org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:674) > at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:705) > at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:669) > at > org.apache.spark.repl.SparkILoop.reallyInterpret$1(SparkILoop.scala:828) > at > org.apache.spark.repl.SparkILoop.interpretStartingWith(SparkILoop.scala:873) > at org.apache.spark.repl.SparkILoop.command(SparkILoop.scala:785) > at > org.apache.spark.repl.SparkILoopInit$$anonfun$initializeSpark$1.apply(SparkILoopInit.scala:123) > at > org.apache.spark.repl.SparkILoopInit$$anonfun$initializeSpark$1.apply(SparkILoopInit.scala:122) > at org.apache.spark.repl.SparkIMain.beQuietDuring(SparkIMain.scala:270) > at > org.apache.spark.repl.SparkILoopInit$class.initializeSpark(SparkILoopInit.scala:122) > at org.apache.spark.repl.SparkILoop.initializeSpark(SparkILoop.scala:60) > at > org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$apply$mcZ$sp$5.apply$mcV$sp(SparkILoop.scala:945) > at > org.apache.spark.repl.SparkILoopInit$class.runThunks(SparkILoopInit.scala:147) > at org.apache.spark.repl.SparkILoop.runThunks(SparkILoop.scala:60) > at > org.apache.spark.repl.SparkILoopInit$class.postInitialization(SparkILoopInit.scala:106) > at > org.apache.spark.repl.SparkILoop.postInitialization(SparkILoop.scala:60) > at > org.apache.spark.repl.SparkILoop$$anonfun$process$1.apply$mcZ$sp(SparkILoop.scala:962) > at > org.apache.spark.repl.SparkILoop$$anonfun$process$1.apply(SparkILoop.scala:916) > at > org.apache.spark.repl.SparkILoop$$anonfun$process$1.apply(SparkILoop.scala:916) > at > scala.tools.nsc.util.ScalaClassLoader$.savingContextLoader(ScalaClassLoader.scala:135) > at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:916) > at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:1011) > at org.apache.spark.repl.Main$.main(Main.scala:31) > at org.apache.spark.repl.Main.main(Main.scala) > at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) > at > sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57) > at > sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43) > at java.lang.reflect.Method.invoke(Method.java:606) > at org.apache.spark.deploy.SparkSubmit$.launch(SparkSubmit.scala:358) > at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:75) > at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala) > Caused by: java.lang.ClassNotFoundException: > org.codehaus.jackson.map.deser.std.StdDeserializer > at java.net.URLClassLoader$1.run(URLClassLoader.java:366) > at java.net.URLClassLoader$1.run(URLClassLoader.java:355) > at java.security.AccessController.doPrivileged(Native Method) > at java.net.URLClassLoader.findClass(URLClassLoader.java:354) > at java.lang.ClassLoader.loadClass(ClassLoader.java:425) > at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:308) > at java.lang.ClassLoader.loadClass(ClassLoader.java:358) > ... 66 more > > > scala> exit > >
