Mohan, You’ll need to register it; we register our serializer in lines 69 to 76 in https://github.com/bigdatagenomics/adam/blob/master/adam-core/src/main/scala/org/bdgenomics/adam/serialization/ADAMKryoRegistrator.scala. Our serializer implementation falls back on the default Avro serializer; you may want to look at Twitter’s Chill serializers, as they may have a higher performance Kryo serializer for Avro.
Regards, Frank Austin Nothaft fnoth...@berkeley.edu fnoth...@eecs.berkeley.edu 202-340-0466 On Sep 18, 2014, at 8:43 AM, mohan.gadm <mohan.g...@gmail.com> wrote: > Thanks for the info frank. > so your suggestion could be to use Avro serializer. > > i just have to configure it like Kryo for the same property? and is there > any registering process for this or just specify serializer? > Also does it effect performance. what measures to be taken to avoid. > (im using kryo just because of its high performance, size compared to avro) > > > > ----- > Thanks & Regards, > Mohan > -- > View this message in context: > http://apache-spark-user-list.1001560.n3.nabble.com/Kryo-fails-with-avro-having-Arrays-and-unions-but-succeeds-with-simple-avro-tp14549p14567.html > Sent from the Apache Spark User List mailing list archive at Nabble.com. > > --------------------------------------------------------------------- > To unsubscribe, e-mail: user-unsubscr...@spark.apache.org > For additional commands, e-mail: user-h...@spark.apache.org >
