In 1.1, AbstractYarnClusterDescriptor pushes contents of flink/lib (local to
where the yarn app is launched) to Yarn with a single directory copy. In 1.0.3
it looked like it was copying the individual jars.
So, yes I did actually change HDFSCopyToLocal, which was easy, but the job
staging in the above class also needs altering. I’m happy to contribute on both
though I won’t be able to get to it until later this week.
-Cliff
On 7/18/16, 3:38 PM, "Ufuk Celebi" <u...@apache.org> wrote:
Hey Cliff! Good to see that we came to the same conclusion :-) What do
you mean with copying of the "lib" folder? This issue should be the
same for both 1.0 and 1.1. Another work around could be to use the
fully async RocksDB snapshots with Flink 1.1-SNAPSHOT.
If you like, you could also work on the issue I've created by
implementing the recursive File copy in Flink (in HDFSCopyToLocal) and
contribute this via a pull request.
– Ufuk
On Mon, Jul 18, 2016 at 7:22 PM, Clifford Resnick
<cresn...@mediamath.com> wrote:
> Hi Ufuk,
>
> My mail was down, so I missed this response. Thanks for that.
>
> On 7/18/16, 10:38 AM, "Ufuk Celebi" <u...@apache.org> wrote:
>
> Hey Cliff!
>
> I was able to reproduce this by locally running a job and RocksDB semi
> asynchronous checkpoints (current default) to S3A. I've created an
> issue here: https://issues.apache.org/jira/browse/FLINK-4228.
>
> Running with S3N it is working as expected. You can use that
> implementation as a work around. I don't know whether it's possible to
> disable creation of MD5 hashes for S3A.
>
> – Ufuk
>
> On Sat, Jul 16, 2016 at 6:26 PM, Clifford Resnick
> <cresn...@mediamath.com> wrote:
> > Using Flink 1.1-SNAPSHOT, Hadoop-aws 2.6.4
> >
> >
> >
> > The error I’m getting is :
> >
> >
> >
> > 11:05:44,425 ERROR
org.apache.flink.streaming.runtime.tasks.StreamTask
> > - Caught exception while materializing asynchronous checkpoints.
> >
> > com.amazonaws.AmazonClientException: Unable to calculate MD5 hash:
> >
/var/folders/t8/k5764ltj4sq4ft06c1zp0nxn928mwr/T/flink-io-247956be-e422-4222-a512-e3ae321b1590/ede87211c622f86d1ef7b2b323076e79/WindowOperator_10_3/dummy_state/31b7ca7b-dc94-4d40-84c7-4f10ebc644a2/local-chk-1
> > (Is a directory)
> >
> > at
> >
com.amazonaws.services.s3.AmazonS3Client.putObject(AmazonS3Client.java:1266)
> >
> > at
> >
com.amazonaws.services.s3.transfer.internal.UploadCallable.uploadInOneChunk(UploadCallable.java:131)
> >
> > at
> >
com.amazonaws.services.s3.transfer.internal.UploadCallable.call(UploadCallable.java:123)
> >
> > at
> >
com.amazonaws.services.s3.transfer.internal.UploadMonitor.call(UploadMonitor.java:139)
> >
> > at
> >
com.amazonaws.services.s3.transfer.internal.UploadMonitor.call(UploadMonitor.java:47)
> >
> > at
java.util.concurrent.FutureTask.run(FutureTask.java:266)
> >
> > at
> >
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
> >
> > at
> >
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
> >
> > at java.lang.Thread.run(Thread.java:745)
> >
> >
> >
> > In the debugger I noticed that some of the uploaded checkpoints are
from the
> > configured /tmp location. These succeed as file in the request is
fully
> > qualified, but I guess it’s different for WindowOperators? Here the
file in
> > the request (using a different /var/folders.. location not
configured by me
> > – must be a mac thing?) is actually a directory. The AWS api is
failing when
> > it tries to calculate an MD5 of the directory. The Flink side of the
> > codepath is hard to discern from debugging because it’s
asynchronous.
> >
> >
> >
> > I get the same issue whether local or on a CentOs- based YARN
cluster.
> > Everything works if I use HDFS instead. Any insight will be greatly
> > appreciated! When I get a chance later I may try S3n or perhaps S3a
with MD5
> > verification skipped.
> >
> >
> >
> > -Cliff
> >
> >
> >
> >
> >
> >
> >
> >
>
>
