Hi,

we have stream job with quite large state (few GB), we're using FSStateBackend and we're storing checkpoints in hdfs. What we observe is that v. often old checkpoints are not discarded properly. In hadoop logs I can see:

2016-05-10 12:21:06,559 INFO BlockStateChange: BLOCK* addToInvalidates: blk_1084791727_11053122 10.10.113.10:50010 2016-05-10 12:21:06,559 INFO org.apache.hadoop.ipc.Server: IPC Server handler 9 on 8020, call org.apache.hadoop.hdfs.protocol.ClientProtocol.delete from 10.10.113.9:49233 Call#12337 Retry#0 org.apache.hadoop.fs.PathIsNotEmptyDirectoryException: `/flink/checkpoints_test/570d6e67d571c109daab468e5678402b/chk-62 is non empty': Directory is not empty at org.apache.hadoop.hdfs.server.namenode.FSDirDeleteOp.delete(FSDirDeleteOp.java:85) at org.apache.hadoop.hdfs.server.namenode.FSNamesystem.delete(FSNamesystem.java:3712)

While on flink side (jobmanager log) we don't see any problems:
2016-05-10 12:20:22,636 [Checkpoint Timer] INFO org.apache.flink.runtime.checkpoint.CheckpointCoordinator - Triggering checkpoint 62 @ 1462875622636 2016-05-10 12:20:32,507 [flink-akka.actor.default-dispatcher-240088] INFO org.apache.flink.runtime.checkpoint.CheckpointCoordinator - Completed checkpoint 62 (in 9843 ms) 2016-05-10 12:20:52,637 [Checkpoint Timer] INFO org.apache.flink.runtime.checkpoint.CheckpointCoordinator - Triggering checkpoint 63 @ 1462875652637 2016-05-10 12:21:06,563 [flink-akka.actor.default-dispatcher-240028] INFO org.apache.flink.runtime.checkpoint.CheckpointCoordinator - Completed checkpoint 63 (in 13909 ms) 2016-05-10 12:21:22,636 [Checkpoint Timer] INFO org.apache.flink.runtime.checkpoint.CheckpointCoordinator - Triggering checkpoint 64 @ 1462875682636

I see in the code that delete operations in flink are done with recursive flag set to false - but I'm not sure why the contents are not being deleted before?
When we were using RocksDB backed we didn't encounter such situation.
we're using flink 1.0.1 and hdfs 2.7.2.

Do anybody has any idea why this could be happening?

thanks,
maciek



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