Hi everyone,
we are testing a long-running streaming application, which shares a yarn
session with a batch job (containing JDBC(In|Out)putFormat) that is triggered
periodically. Unfortunately, the session is dying after a few runs of the batch
job. In fact, each run of the batch job kills one task manager due to OOME
PermGen:
--
2016-04-14 16:53:55,212 INFO org.apache.flink.runtime.taskmanager.Task
- DataSink
(org.apache.flink.api.java.io.jdbc.JDBCOutputFormat@787c33b) (1/3) switched to
FAILED with exception.
java.lang.OutOfMemoryError: PermGen space
at java.lang.ClassLoader.defineClass1(Native Method)
at java.lang.ClassLoader.defineClass(ClassLoader.java:800)
at
java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
at java.net.URLClassLoader.defineClass(URLClassLoader.java:449)
at java.net.URLClassLoader.access$100(URLClassLoader.java:71)
at java.net.URLClassLoader$1.run(URLClassLoader.java:361)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:425)
at java.lang.ClassLoader.loadClass(ClassLoader.java:358)
at java.lang.ClassLoader.defineClass1(Native Method)
at java.lang.ClassLoader.defineClass(ClassLoader.java:800)
at
java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
at java.net.URLClassLoader.defineClass(URLClassLoader.java:449)
at java.net.URLClassLoader.access$100(URLClassLoader.java:71)
at java.net.URLClassLoader$1.run(URLClassLoader.java:361)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:425)
at java.lang.ClassLoader.loadClass(ClassLoader.java:358)
at
oracle.jdbc.driver.OraclePreparedStatement.<clinit>(OraclePreparedStatement.java:102)
at
oracle.jdbc.driver.T4CDriverExtension.allocatePreparedStatement(T4CDriverExtension.java:67)
at
oracle.jdbc.driver.PhysicalConnection.prepareStatement(PhysicalConnection.java:3523)
at
oracle.jdbc.driver.PhysicalConnection.prepareStatement(PhysicalConnection.java:3409)
at
org.apache.flink.api.java.io.jdbc.JDBCOutputFormat.open(JDBCOutputFormat.java:79)
at
org.apache.flink.runtime.operators.DataSinkTask.invoke(DataSinkTask.java:186)
at org.apache.flink.runtime.taskmanager.Task.run(Task.java:559)
at java.lang.Thread.run(Thread.java:744)
2016-04-14 16:53:55,489 ERROR org.apache.flink.runtime.taskmanager.Task
- FATAL - exception in task exception handler
java.lang.OutOfMemoryError: PermGen space
at sun.misc.Unsafe.defineClass(Native Method)
at sun.reflect.ClassDefiner.defineClass(ClassDefiner.java:63)
at
sun.reflect.MethodAccessorGenerator$1.run(MethodAccessorGenerator.java:399)
at
sun.reflect.MethodAccessorGenerator$1.run(MethodAccessorGenerator.java:396)
at java.security.AccessController.doPrivileged(Native Method)
at
sun.reflect.MethodAccessorGenerator.generate(MethodAccessorGenerator.java:395)
at
sun.reflect.MethodAccessorGenerator.generateSerializationConstructor(MethodAccessorGenerator.java:113)
at
sun.reflect.ReflectionFactory.newConstructorForSerialization(ReflectionFactory.java:331)
at
java.io.ObjectStreamClass.getSerializableConstructor(ObjectStreamClass.java:1376)
at java.io.ObjectStreamClass.access$1500(ObjectStreamClass.java:72)
at java.io.ObjectStreamClass$2.run(ObjectStreamClass.java:493)
at java.io.ObjectStreamClass$2.run(ObjectStreamClass.java:468)
at java.security.AccessController.doPrivileged(Native Method)
at java.io.ObjectStreamClass.<init>(ObjectStreamClass.java:468)
at java.io.ObjectStreamClass.lookup(ObjectStreamClass.java:365)
at java.io.ObjectStreamClass.<init>(ObjectStreamClass.java:464)
at java.io.ObjectStreamClass.lookup(ObjectStreamClass.java:365)
at java.io.ObjectStreamClass.<init>(ObjectStreamClass.java:464)
at java.io.ObjectStreamClass.lookup(ObjectStreamClass.java:365)
at java.io.ObjectStreamClass.<init>(ObjectStreamClass.java:464)
at java.io.ObjectStreamClass.lookup(ObjectStreamClass.java:365)
at java.io.ObjectOutputStream.writeObject0(ObjectOutputStream.java:1133)
at java.io.ObjectOutputStream.writeObject(ObjectOutputStream.java:347)
at
org.apache.flink.util.InstantiationUtil.serializeObject(InstantiationUtil.java:300)
at
org.apache.flink.runtime.util.SerializedThrowable.<init>(SerializedThrowable.java:83)
at
org.apache.flink.runtime.taskmanager.TaskExecutionState.<init>(TaskExecutionState.java:108)
at
org.apache.flink.runtime.taskmanager.TaskExecutionState.<init>(TaskExecutionState.java:78)
at
org.apache.flink.runtime.taskmanager.Task.notifyObservers(Task.java:865)
at org.apache.flink.runtime.taskmanager.Task.run(Task.java:616)
at java.lang.Thread.run(Thread.java:744)
2016-04-14 16:53:55,489 ERROR org.apache.flink.runtime.taskmanager.Task
- FATAL - exception in task exception handler
java.lang.OutOfMemoryError: PermGen space
at sun.misc.Unsafe.defineClass(Native Method)
at sun.reflect.ClassDefiner.defineClass(ClassDefiner.java:63)
at
sun.reflect.MethodAccessorGenerator$1.run(MethodAccessorGenerator.java:399)
at
sun.reflect.MethodAccessorGenerator$1.run(MethodAccessorGenerator.java:396)
at java.security.AccessController.doPrivileged(Native Method)
at
sun.reflect.MethodAccessorGenerator.generate(MethodAccessorGenerator.java:395)
at
sun.reflect.MethodAccessorGenerator.generateSerializationConstructor(MethodAccessorGenerator.java:113)
at
sun.reflect.ReflectionFactory.newConstructorForSerialization(ReflectionFactory.java:331)
at
java.io.ObjectStreamClass.getSerializableConstructor(ObjectStreamClass.java:1376)
at java.io.ObjectStreamClass.access$1500(ObjectStreamClass.java:72)
at java.io.ObjectStreamClass$2.run(ObjectStreamClass.java:493)
at java.io.ObjectStreamClass$2.run(ObjectStreamClass.java:468)
at java.security.AccessController.doPrivileged(Native Method)
at java.io.ObjectStreamClass.<init>(ObjectStreamClass.java:468)
at java.io.ObjectStreamClass.lookup(ObjectStreamClass.java:365)
at java.io.ObjectStreamClass.<init>(ObjectStreamClass.java:464)
at java.io.ObjectStreamClass.lookup(ObjectStreamClass.java:365)
at java.io.ObjectStreamClass.<init>(ObjectStreamClass.java:464)
at java.io.ObjectStreamClass.lookup(ObjectStreamClass.java:365)
at java.io.ObjectStreamClass.<init>(ObjectStreamClass.java:464)
at java.io.ObjectStreamClass.lookup(ObjectStreamClass.java:365)
at java.io.ObjectOutputStream.writeObject0(ObjectOutputStream.java:1133)
at java.io.ObjectOutputStream.writeObject(ObjectOutputStream.java:347)
at
org.apache.flink.util.InstantiationUtil.serializeObject(InstantiationUtil.java:300)
at
org.apache.flink.runtime.util.SerializedThrowable.<init>(SerializedThrowable.java:83)
at
org.apache.flink.runtime.taskmanager.TaskExecutionState.<init>(TaskExecutionState.java:108)
at
org.apache.flink.runtime.taskmanager.TaskExecutionState.<init>(TaskExecutionState.java:78)
at
org.apache.flink.runtime.taskmanager.Task.notifyObservers(Task.java:865)
at org.apache.flink.runtime.taskmanager.Task.run(Task.java:616)
at java.lang.Thread.run(Thread.java:744)-- This problem seems to be reproducible. In the first run it happens towards the end of the job in a JDBCOutputFormat. From then on, an analogous exception is thrown in the JDBCInputFormat, an earlier operator. We suspect there might be a memory leak caused by the Classloader, any ideas? Best regards, Max — Maximilian Bode * Software Consultant * [email protected] TNG Technology Consulting GmbH, Betastr. 13a, 85774 Unterföhring Geschäftsführer: Henrik Klagges, Christoph Stock, Dr. Robert Dahlke Sitz: Unterföhring * Amtsgericht München * HRB 135082
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