You are running into GC issues. 

>> WARN [ScheduledTasks:1] 2012-01-22 12:53:42,804 GCInspector.java (line 146) 
>> Heap is 0.7767292149986439 full.  You may need to reduce memtable and/or 
>> cache sizes.  Cassandra will now flush up to the two largest memtables to 
>> free up memory.  Adjust flush_largest_memtables_at threshold in 
>> cassandra.yaml if you don't want Cassandra to do this automatically

Can you reduce the size of the caches ? 

As you are under low load, does it correlate with compaction or repair 
processes ? Check node tool compactioninfo

Do you have wide rows ? Checlk the max row size with nodetool cfstats. 

Also, if you have made any changes to the default memory and gc settings try 
reverting them. 


Hope that helps. 


-----------------
Aaron Morton
Freelance Developer
@aaronmorton
http://www.thelastpickle.com

On 26/01/2012, at 5:24 AM, Vitalii Tymchyshyn wrote:

> According to the log, I don't see much time spent for GC. You can still check 
> it with jstat or uncomment GC logging in cassandra-env.sh. Are you sure 
> you've identified the thread correctly?
> It's still possible that you have memory spike where GCInspector simply has 
> no chance to run between Full GC rounds. Checking with jstat or adding GC 
> logging may help to diagnose.
> 
> 25.01.12 17:24, Matthew Trinneer написав(ла):
>> Here is a snippet of what I'm getting out of system.log for GC.  Anything is 
>> there provide a clue?
>> 
>>  WARN [ScheduledTasks:1] 2012-01-22 12:53:42,804 GCInspector.java (line 146) 
>> Heap is 0.7767292149986439 full.  You may need to reduce memtable and/or 
>> cache sizes.  Cassandra will now flush up to the two largest memtables to 
>> free up memory.  Adjust flush_largest_memtables_at threshold in 
>> cassandra.yaml if you don't want Cassandra to do this automatically
>>  INFO [ScheduledTasks:1] 2012-01-22 12:54:57,685 GCInspector.java (line 123) 
>> GC for ConcurrentMarkSweep: 240 ms for 1 collections, 111478936 used; max is 
>> 8547991552
>>  INFO [ScheduledTasks:1] 2012-01-22 15:12:21,710 GCInspector.java (line 123) 
>> GC for ConcurrentMarkSweep: 1141 ms for 1 collections, 167667688 used; max 
>> is 8547991552
>>  INFO [ScheduledTasks:1] 2012-01-23 14:20:32,862 GCInspector.java (line 123) 
>> GC for ParNew: 205 ms for 1 collections, 2894546328 used; max is 8547991552
>>  INFO [ScheduledTasks:1] 2012-01-23 20:25:06,541 GCInspector.java (line 123) 
>> GC for ParNew: 240 ms for 1 collections, 4602331064 used; max is 8547991552
>>  INFO [ScheduledTasks:1] 2012-01-24 13:24:57,473 GCInspector.java (line 123) 
>> GC for ConcurrentMarkSweep: 27869 ms for 1 collections, 6376733632 used; max 
>> is 8547991552
>>  INFO [ScheduledTasks:1] 2012-01-24 13:25:24,879 GCInspector.java (line 123) 
>> GC for ConcurrentMarkSweep: 26306 ms for 1 collections, 6392079368 used; max 
>> is 8547991552
>>  INFO [ScheduledTasks:1] 2012-01-24 13:27:12,991 GCInspector.java (line 123) 
>> GC for ConcurrentMarkSweep: 238 ms for 1 collections, 131710776 used; max is 
>> 8547991552
>>  INFO [ScheduledTasks:1] 2012-01-24 13:55:48,326 GCInspector.java (line 123) 
>> GC for ConcurrentMarkSweep: 609 ms for 1 collections, 50380160 used; max is 
>> 8547991552
>>  INFO [ScheduledTasks:1] 2012-01-24 14:34:41,392 GCInspector.java (line 123) 
>> GC for ParNew: 325 ms for 1 collections, 1340375240 used; max is 8547991552
>>  INFO [ScheduledTasks:1] 2012-01-24 20:55:19,636 GCInspector.java (line 123) 
>> GC for ParNew: 233 ms for 1 collections, 6387236992 used; max is 8547991552
>>  INFO [ScheduledTasks:1] 2012-01-25 14:43:28,921 GCInspector.java (line 123) 
>> GC for ParNew: 337 ms for 1 collections, 7031219304 used; max is 8547991552
>>  INFO [ScheduledTasks:1] 2012-01-25 14:43:51,043 GCInspector.java (line 123) 
>> GC for ParNew: 211 ms for 1 collections, 7025723712 used; max is 8547991552
>>  INFO [ScheduledTasks:1] 2012-01-25 14:50:00,012 GCInspector.java (line 123) 
>> GC for ConcurrentMarkSweep: 51534 ms for 2 collections, 6844998736 used; max 
>> is 8547991552
>>  INFO [ScheduledTasks:1] 2012-01-25 14:51:22,249 GCInspector.java (line 123) 
>> GC for ConcurrentMarkSweep: 250 ms for 1 collections, 154848440 used; max is 
>> 8547991552
>>  INFO [ScheduledTasks:1] 2012-01-25 14:57:46,519 GCInspector.java (line 123) 
>> GC for ParNew: 244 ms for 1 collections, 190838344 used; max is 8547991552
>>  INFO [ScheduledTasks:1] 2012-01-25 15:00:21,693 GCInspector.java (line 123) 
>> GC for ConcurrentMarkSweep: 389 ms for 1 collections, 28748448 used; max is 
>> 8547991552
>> 
>> 
>> 
>> On 2012-01-25, at 10:09 AM, Vitalii Tymchyshyn wrote:
>> 
>>> Hello.
>>> 
>>> What's in the logs? It should output something like "Hey, you've got most 
>>> of your memory used. I am going to flush some of memtables". Sorry, I don't 
>>> remember exact spelling, but it's gong from GC, so it should be greppable 
>>> by "GC".
>>> 
>>> 25.01.12 16:26, Matthew Trinneer написав(ла):
>>>> Hello Community,
>>>> 
>>>> Am troubleshooting an issue with sudden and sustained high CPU on nodes in 
>>>> a 3 node cluster.  This takes place when there is minimal load on the 
>>>> servers, and continues indefinitely until I stop and restart a node.  All 
>>>> nodes (3) seem to be effected by the same issue, however it doesn't occur 
>>>> simultaneous on them (although all potentially could be effected at the 
>>>> same time).
>>>> 
>>>> Here's what I've been doing to troubleshoot.
>>>> 
>>>> * vmstat - have run on all servers and there is *no* swap going on
>>>> 
>>>> * iostat - have run on all servers and there is no indication that the 
>>>> disk is in anyway a bottleneck
>>>> 
>>>> * nodetool - nothing is backed up.  Not using all available heap (about 
>>>> 2/3rds).
>>>> 
>>>> * Have tracked it down to a specific thread (top -H).  When I find that 
>>>> thread's hex equivalent in a jstack dump I see the following
>>>> 
>>>>    "Concurrent Mark-Sweep GC Thread" prio=10 tid=0x0000000001d48800 
>>>> nid=0x4534 runnable
>>>> 
>>>> 
>>>> Which makes me think that perhaps it's something to do with GC 
>>>> configuration.   Unfortunately I'm not able to determine why this might be 
>>>> happening.  Any suggestions on how to continue troubleshooting?
>>>> 
>>>> btw - here's my jvm (just in case)
>>>> 
>>>> java version "1.6.0_22"
>>>> Java(TM) SE Runtime Environment (build 1.6.0_22-b04)
>>>> Java HotSpot(TM) 64-Bit Server VM (build 17.1-b03, mixed mode)
>>>> 
>>>> 
>>>> Thanks!
>>>> 
>>>> Matt
>>>> 
> 

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