I didn't solved it. Since it is a test cluster I deleted all the data. I copied some sstables from my production cluster and I tried again, this time I didn't have this problem. I am planing on removing everything from this test cluster. I will start all over again with 0.6.x , then I will load it with 10th of GB of data (not sstable copy) and test the upgrade again.
I did a mistake that I didn't backup the data files before I upgraded. Shimi On Tue, Feb 22, 2011 at 2:24 PM, David Boxenhorn <da...@lookin2.com> wrote: > Shimi, > > I am getting the same error that you report here. What did you do to solve > it? > > David > > > On Thu, Feb 10, 2011 at 2:54 PM, shimi <shim...@gmail.com> wrote: > >> I upgraded the version on all the nodes but I still gets the Exceptions. >> I run cleanup on one of the nodes but I don't think there is any cleanup >> going on. >> >> Another weird thing that I see is: >> INFO [CompactionExecutor:1] 2011-02-10 12:08:21,353 >> CompactionIterator.java (line 135) Compacting large row >> 333531353730363835363237353338383836383035363036393135323132383 >> 73630323034313a446f20322e384c20656e67696e657320686176652061646a75737461626c65206c696674657273 >> (725849473109 bytes) incrementally >> >> In my production version the largest row is 10259. It shouldn't be >> different in this case. >> >> The first Exception is been thrown on 3 nodes during compaction. >> The second Exception (Internal error processing get_range_slices) is been >> thrown all the time by a forth node. I disabled gossip and any client >> traffic to it and I still get the Exceptions. >> Is it possible to boot a node with gossip disable? >> >> Shimi >> >> On Thu, Feb 10, 2011 at 11:11 AM, aaron morton >> <aa...@thelastpickle.com>wrote: >> >>> I should be able to repair, install the new version and kick off nodetool >>> repair . >>> >>> If you are uncertain search for cassandra-1992 on the list, there has >>> been some discussion. You can also wait till some peeps in the states wake >>> up if you want to be extra sure. >>> >>> The number if the number of columns the iterator is going to return from >>> the row. I'm guessing that because this happening during compaction it's >>> using asked for the maximum possible number of columns. >>> >>> Aaron >>> >>> >>> >>> On 10 Feb 2011, at 21:37, shimi wrote: >>> >>> On 10 Feb 2011, at 13:42, Dan Hendry wrote: >>> >>> Out of curiosity, do you really have on the order of 1,986,622,313 >>> elements (I believe elements=keys) in the cf? >>> >>> Dan >>> >>> No. I was too puzzled by the numbers >>> >>> >>> On Thu, Feb 10, 2011 at 10:30 AM, aaron morton <aa...@thelastpickle.com> >>> wrote: >>> >>>> Shimi, >>>> You may be seeing the result of CASSANDRA-1992, are you able to test >>>> with the most recent 0.7 build ? >>>> https://hudson.apache.org/hudson/job/Cassandra-0.7/ >>>> >>>> >>>> Aaron >>>> >>> I will. I hope the data was not corrupted. >>> >>> >>> >>> On Thu, Feb 10, 2011 at 10:30 AM, aaron morton >>> <aa...@thelastpickle.com>wrote: >>> >>>> Shimi, >>>> You may be seeing the result of CASSANDRA-1992, are you able to test >>>> with the most recent 0.7 build ? >>>> https://hudson.apache.org/hudson/job/Cassandra-0.7/ >>>> >>>> >>>> Aaron >>>> >>>> On 10 Feb 2011, at 13:42, Dan Hendry wrote: >>>> >>>> Out of curiosity, do you really have on the order of 1,986,622,313 >>>> elements (I believe elements=keys) in the cf? >>>> >>>> Dan >>>> >>>> *From:* shimi [mailto:shim...@gmail.com] >>>> *Sent:* February-09-11 15:06 >>>> *To:* user@cassandra.apache.org >>>> *Subject:* Exceptions on 0.7.0 >>>> >>>> I have a 4 node test cluster were I test the port to 0.7.0 from 0.6.X >>>> On 3 out of the 4 nodes I get exceptions in the log. >>>> I am using RP. >>>> Changes that I did: >>>> 1. changed the replication factor from 3 to 4 >>>> 2. configured the nodes to use Dynamic Snitch >>>> 3. RR of 0.33 >>>> >>>> I run repair on 2 nodes before I noticed the errors. One of them is >>>> having the first error and the other the second. >>>> I restart the nodes but I still get the exceptions. >>>> >>>> The following Exception I get from 2 nodes: >>>> WARN [CompactionExecutor:1] 2011-02-09 19:50:51,281 BloomFilter.java >>>> (line 84) Cannot provide an optimal Bloom >>>> Filter for 1986622313 elements (1/4 buckets per element). >>>> ERROR [CompactionExecutor:1] 2011-02-09 19:51:10,190 >>>> AbstractCassandraDaemon.java (line 91) Fatal exception in >>>> thread Thread[CompactionExecutor:1,1,main] >>>> java.io.IOError: java.io.EOFException >>>> at >>>> org.apache.cassandra.io.sstable.SSTableIdentityIterator.next(SSTableIdentityIterator.java:105) >>>> at >>>> org.apache.cassandra.io.sstable.SSTableIdentityIterator.next(SSTableIdentityIterator.java:34) >>>> at >>>> org.apache.commons.collections.iterators.CollatingIterator.set(CollatingIterator.java:284) >>>> at >>>> org.apache.commons.collections.iterators.CollatingIterator.least(CollatingIterator.java:326) >>>> at >>>> org.apache.commons.collections.iterators.CollatingIterator.next(CollatingIterator.java:230) >>>> at >>>> org.apache.cassandra.utils.ReducingIterator.computeNext(ReducingIterator.java:68) >>>> at >>>> com.google.common.collect.AbstractIterator.tryToComputeNext(AbstractIterator.java:136) >>>> at >>>> com.google.common.collect.AbstractIterator.hasNext(AbstractIterator.java:131) >>>> at >>>> com.google.common.collect.Iterators$7.computeNext(Iterators.java:604) >>>> at >>>> com.google.common.collect.AbstractIterator.tryToComputeNext(AbstractIterator.java:136) >>>> at >>>> com.google.common.collect.AbstractIterator.hasNext(AbstractIterator.java:131) >>>> at >>>> org.apache.cassandra.db.ColumnIndexer.serializeInternal(ColumnIndexer.java:76) >>>> at >>>> org.apache.cassandra.db.ColumnIndexer.serialize(ColumnIndexer.java:50) >>>> at >>>> org.apache.cassandra.io.LazilyCompactedRow.<init>(LazilyCompactedRow.java:88) >>>> at >>>> org.apache.cassandra.io.CompactionIterator.getCompactedRow(CompactionIterator.java:136) >>>> at >>>> org.apache.cassandra.io.CompactionIterator.getReduced(CompactionIterator.java:107) >>>> at >>>> org.apache.cassandra.io.CompactionIterator.getReduced(CompactionIterator.java:42) >>>> at >>>> org.apache.cassandra.utils.ReducingIterator.computeNext(ReducingIterator.java:73) >>>> at >>>> com.google.common.collect.AbstractIterator.tryToComputeNext(AbstractIterator.java:136) >>>> at >>>> com.google.common.collect.AbstractIterator.hasNext(AbstractIterator.java:131) >>>> at >>>> org.apache.commons.collections.iterators.FilterIterator.setNextObject(FilterIterator.java:183) >>>> at >>>> org.apache.commons.collections.iterators.FilterIterator.hasNext(FilterIterator.java:94) >>>> at >>>> org.apache.cassandra.db.CompactionManager.doCompaction(CompactionManager.java:323) >>>> at >>>> org.apache.cassandra.db.CompactionManager$1.call(CompactionManager.java:122) >>>> at >>>> org.apache.cassandra.db.CompactionManager$1.call(CompactionManager.java:92) >>>> at >>>> java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:303) >>>> at java.util.concurrent.FutureTask.run(FutureTask.java:138) >>>> at >>>> java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886) >>>> at >>>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908) >>>> at java.lang.Thread.run(Thread.java:619) >>>> Caused by: java.io.EOFException >>>> at java.io.RandomAccessFile.readFully(RandomAccessFile.java:383) >>>> at >>>> org.apache.cassandra.utils.FBUtilities.readByteArray(FBUtilities.java:280) >>>> at >>>> org.apache.cassandra.db.ColumnSerializer.deserialize(ColumnSerializer.java:76) >>>> at >>>> org.apache.cassandra.db.ColumnSerializer.deserialize(ColumnSerializer.java:35) >>>> at >>>> org.apache.cassandra.io.sstable.SSTableIdentityIterator.next(SSTableIdentityIterator.java:101) >>>> ... 29 more >>>> >>>> >>>> On another node I get: >>>> >>>> ERROR [pool-1-thread-2] 2011-02-09 19:48:32,137 Cassandra.java (line >>>> 2876) Internal error processing get_range_ >>>> slices >>>> java.lang.RuntimeException: error reading 1 of 1970563183 >>>> at >>>> org.apache.cassandra.db.columniterator.SimpleSliceReader.computeNext(SimpleSliceReader.java:82) >>>> at >>>> org.apache.cassandra.db.columniterator.SimpleSliceReader.computeNext(SimpleSliceReader.java:39) >>>> at >>>> com.google.common.collect.AbstractIterator.tryToComputeNext(AbstractIterator.java:136) >>>> at >>>> com.google.common.collect.AbstractIterator.hasNext(AbstractIterator.java:131) >>>> at >>>> org.apache.cassandra.db.columniterator.SSTableSliceIterator.hasNext(SSTableSliceIterator.java:108) >>>> at >>>> org.apache.commons.collections.iterators.CollatingIterator.anyHasNext(CollatingIterator.java:364) >>>> at >>>> org.apache.commons.collections.iterators.CollatingIterator.hasNext(CollatingIterator.java:217) >>>> at >>>> org.apache.cassandra.db.RowIteratorFactory$3.getReduced(RowIteratorFactory.java:136) >>>> at >>>> org.apache.cassandra.db.RowIteratorFactory$3.getReduced(RowIteratorFactory.java:106) >>>> at >>>> org.apache.cassandra.utils.ReducingIterator.computeNext(ReducingIterator.java:73) >>>> at >>>> com.google.common.collect.AbstractIterator.tryToComputeNext(AbstractIterator.java:136) >>>> at >>>> com.google.common.collect.AbstractIterator.hasNext(AbstractIterator.java:131) >>>> at >>>> org.apache.cassandra.db.RowIterator.hasNext(RowIterator.java:49) >>>> at >>>> org.apache.cassandra.db.ColumnFamilyStore.getRangeSlice(ColumnFamilyStore.java:1294) >>>> at >>>> org.apache.cassandra.service.StorageProxy.getRangeSlice(StorageProxy.java:438) >>>> at >>>> org.apache.cassandra.thrift.CassandraServer.get_range_slices(CassandraServer.java:473) >>>> at >>>> org.apache.cassandra.thrift.Cassandra$Processor$get_range_slices.process(Cassandra.java:2868) >>>> at >>>> org.apache.cassandra.thrift.Cassandra$Processor.process(Cassandra.java:2555) >>>> at >>>> org.apache.cassandra.thrift.CustomTThreadPoolServer$WorkerProcess.run(CustomTThreadPoolServer.java:1 >>>> 67) >>>> at >>>> java.util.concurrent.ThreadPoolExecutor$Worker.runTask(ThreadPoolExecutor.java:886) >>>> at >>>> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:908) >>>> at java.lang.Thread.run(Thread.java:619) >>>> Caused by: java.io.EOFException >>>> at java.io.RandomAccessFile.readFully(RandomAccessFile.java:383) >>>> at >>>> org.apache.cassandra.utils.FBUtilities.readByteArray(FBUtilities.java:280) >>>> at >>>> org.apache.cassandra.db.ColumnSerializer.deserialize(ColumnSerializer.java:94) >>>> at >>>> org.apache.cassandra.db.ColumnSerializer.deserialize(ColumnSerializer.java:35) >>>> at >>>> org.apache.cassandra.db.columniterator.SimpleSliceReader.computeNext(SimpleSliceReader.java:78) >>>> ... 21 more >>>> >>>> any idea what went wrong? >>>> Shimi >>>> >>>> No virus found in this incoming message. >>>> Checked by AVG - www.avg.com >>>> Version: 9.0.872 / Virus Database: 271.1.1/3432 - Release Date: 02/09/11 >>>> 02:34:00 >>>> >>>> >>>> >>> >>> >> >
