Thanks. I've commented below

> -----Original Message-----
> From: Rainer Noack [mailto:rai...@noacks.net]
> Sent: Monday, November 07, 2011 2:37 PM
> To: d...@ant.apache.org; Ant Users List
> Subject: Re: difference between unzip task and unzip executable
> 
> Hi Justin,
> 
> sorry, but your question was a little hard to understand which might be
> the reason, that you got no answer until now.
> 
> The reason for your problem is, that ant resolves path-like structures
> when it is parsing the build.xml - file and drops irrelevant entries.
> but your path only becomes relevant after you'd unzipped src.zip. (which
> happens later on execution-time)
> you can evaluate this as the reason by unzip first (manually) then run
> ant with your build.xml. (comment out delete and unzip tasks) -> should
> work as expected.
> 
> There are some workarounds:
> 1. the hard and ugly way: run ant twice (may be controlled by a batch file).

Tried that by putting the <unzip> in a dedicated target and running Ant once 
for the unzip target and a second time for the javadoc target, same result. 
Also, using the ${JAVA_HOME}/bin/jar command to extract src.zip before running 
the javadoc target also does not generate inherited docs. Conversely, if I 
replace the <unzip> task with an <exec> task calling /usr/bin/unzip, the 
javadocs are correct. 

> 2. more ant-friendy: use <ant>-task for the <javadoc>-task.

I'm looking at the manual for this and am a little confused as to how to 
properly use it.

> 3. try the new ant 1.8.2. feature (see snip from manual path-like
> structures below , i didn't try it out until now)
> 
> /"Since Ant 1.8.2/ the location attribute can also contain a wildcard in
> its last path component (i.e. it can end in a "*") in order to support
> wildcard CLASSPATHs introduced with Java6. Ant will not expand or
> evaluate the wildcards and the resulting path may not work as anything
> else but a CLASSPATH - or even as a CLASSPATH for a Java VM prior to Java6."
> 

I changed the <pathelement path="${basedir}/jdk"/> to use location instead of 
path, same result.

As a further point of clarification as to the issue as I currently see it, I 
think there is some bug in the <unzip> task and/or the jar command provided 
with the JDK. 

If I take Ant out of the picture for generating javadocs, and run the 
${JAVA_HOME}/bin/javadoc executable using the arguments listed in a -verbose 
Ant run, and only use Ant to extract src.zip, the problem exists (also if I use 
the ${JAVA_HOME}/bin/jar command to extract src.zip). The output of javadoc is 
just illustrating that there is some so-far undetectable difference in contents 
from using jar/<unzip> and using unzip executable provided by RedHat built from 
http://www.info-zip.org/pub/infozip/UnZip.html. The contents produced by 
jar/<unzip> are ignored by javadoc (both the executable and the Ant task), 
while the contents produced by /usr/bin/unzip are not ignored by javadoc.

So maybe I'm asking the wrong forum, but it seemed the best place to start, and 
oracle.com seems hell-bent on keeping me out of their forums. 

> Am 07.11.2011 20:52, schrieb Justin Georgeson:
> > I think it stripped the attachment, so I put it here
> >
> > http://www.mediafire.com/?a1snm5i1n7tsmdx
> >
> > -----Original Message-----
> > From: Justin Georgeson [mailto:jgeorge...@lgc.com]
> > Sent: Monday, November 07, 2011 1:46 PM
> > To: d...@ant.apache.org
> > Subject: RE: difference between unzip task and unzip executable
> >
> > I started asking this on the user list, but no response, and it seems deeper
> than just incorrect usage. Apologies if that's what it turns out to be.
> >
> > I've broken it down into a very basic build.xml and single source code file.
> The build.xml has a single target to unzip, and run javadoc. I've attached a
> bz2 archive of the build.xml, the source file, and a -debug log of using the
> unzip task and relying on the src.zip having been expanded with the native OS
> unzip command before running. The single source code file implements the
> javax.naming.Context interface. When run as-is (build-internal-unzip.log) the
> javadocs do not inherit from javax.naming.Context. If you comment out lines 6
> and 7 from build.xml and run 'unzip -d jdk ${JAVA_HOME}/src.zip' and then
> build (build-external-unzip.log) the javadocs do inherit from
> javax.naming.Context. I've tried using 'jar xvf ${JAVA_HOME}/src.zip' and that
> has the same result as using the<unzip>  task. The javax/naming/Context.java
> file is the same (compared MD5 checksums) no matter how I uncompress src.zip.
> >
> > -----Original Message-----
> > From: Justin Georgeson
> > Sent: Friday, November 04, 2011 2:21 PM
> > To: user@ant.apache.org
> > Subject: RE: difference between unzip task and unzip executable
> >
> > Just to eliminate any possibility of file handle closure, disk I/O flushing,
> etc. I put the<unzip>  in a separate target that only does the unzip, ran that
> target by itself, and then ran ant a second time for the javadoc target and it
> still fails. I don't understand what the problem can be when everything says
> the contents of the files are identical. Even if I use the<unzip>  task to put
> the contents of src.zip in the 'src' folder that my source code is in, there's
> no javadoc inheritance.
> >
> > -----Original Message-----
> > From: Justin Georgeson [mailto:jgeorge...@lgc.com]
> > Sent: Friday, November 04, 2011 1:35 PM
> > To: user@ant.apache.org
> > Subject: difference between unzip task and unzip executable
> >
> > I'm trying to get javadoc inheritance working from JDK classes, and what I'm
> finding is if I use
> >
> > <unzip src="${env.JAVA_HOME}/src.zip dest="${env.BUILD_DIR}/docs/jdk"/>
> >
> > in my Ant target, the javadoc task ignores that sourcepath entry because it
> doesn't contain any packages matching my packagenames parameter (running with
> -verbose says it "doesn't contain any packages, dropping it"). If I run 'unzip
> -d ${BUILD_DIR}/docs/jdk ${JAVA_HOME}/src.zip' in the shell before running Ant
> (and the target just assumes the folder is there) everything works right. I've
> run a 'diff -qr' on the result of both unzip methods and no differences are
> found, even 'rsync -acv' says they're the same
> >
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