For disk repair, I use Disk Warrior. Your disc should,be ok using Disc Utility, 
tho. But Disk Warrior has saved data not readable by Disc Utility for me.
Bill

William Prothero
http://es.earthednet.org

> On Mar 1, 2015, at 7:48 PM, Paul Hibbert <p...@livecode.org> wrote:
> 
> Thanks for reminding me about fsck, I haven't used that in a long time, then 
> after reading this article I remembered why…
> 
> https://support.apple.com/en-ca/HT203176
> 
> …it's no longer recommended by Apple since OS X 10.4, but I do realise it can 
> be a useful fallback if all else fails.
> 
> I had already used Disk Utility to check the volume and it didn't come up 
> with anything, but because I can't replicate the original problem now, even 
> by putting all files back where they were, that's why I suspected a folder 
> index problem. The disk on this iMac is getting a bit old now (5 yrs +), so 
> maybe it's an indication that it's time to think about a replacement.
> 
> Paul
> 
>> On Mar 1, 2015, at 4:45 AM, James Hale <ja...@thehales.id.au> wrote:
>> 
>> Paul wrote...
>>> I ran Disk Utility to check the HD for repair/permissions and all is fine.
>> 
>> 
>> Checking the permissions only checks software installed by Apple giants 
>> their receipts. Nothing else is checked, certainly nothing related to 
>> directory structures.
>> 
>> If DO you think there might have been some corruption or glitch in the 
>> folder structure then you might want to use the disk utility to verify the 
>> volume. You could also boot in single user mode and run fsck as indicated on 
>> screen once the boot is complete.
>> 
>> James
>> 
>> 
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