Hi Julian, I have the UMLS version 2013AA installed. The index using the following configuration contains 13,520,173 rows. The size is approximately 2.5 G when I look specifically at the size of the tables for that configuration. I don't think that would be a direct comparison though. I have a number of index files created so I can only give what I think is the estimate -- total I am using 575G.
Here is the configuration: SAB :: include SNOMEDCT REL :: include PAR, CHD Just in case this is different from yours. I do not remember how long it took exactly. I started it on a Friday and went away for the weekend. SNOMEDCT is the largest source so it normally takes a couple days to process all of the nodes to create the index. I hope this helps somewhat. Please let us know if you have additional questions! Best regards, Bridget On Fri, Dec 27, 2013 at 6:41 AM, julian varghese <[email protected]>wrote: > Hi Bridget and Ted, > > my apologies if this question showed up before, I tried to add the question > to the yahoo mailing group but I guess it did not work, so to make sure > I'm writing > this question directly to you: > > Having installed Umls-Similarity and the UMLS database from 2013 and the > latest version of umls similarity/interface on a Ubuntu System (allocated > memory 8gb,intel xeo 3 ghz). > The UMLS index for SnomedCT is being created (database: > umlsinterfaceindex). > To do that I listed "SNOMEDCT_US" in the SAB-source. > > > Can somebody tell me how large the umlsinterfaceindex database for > SnomedCT is or will be and how long it usually takes to have the > SnomedCT-index created? > > Right now I have installed only the important UMLS tables which are 11 GB > big, > but umlsinterfaceindex database ist getting larger and larger, it's now at > 14 gb... just want to know whether this is normal, since the index is > getting bigger > than the database itself... > > Thanks, > Julian >
