My bug 509734 was marked as a duplicate of this one. This was a special
case using the atd job scheduler. At jobs launched by ldap users worked,
but at jobs launched by root did *not* work. atd was doing a group
lookup, and nss was dropping privileges, thus breaking root-launched at
jobs. To work around this, I added the following line to my
/etc/ldap.conf:

nss_initgroups_ignoreusers  <users>

where <users> is the list of local non-ldap users, particularly root!
There is a script that is part of nss-ldap that does this for you:

/usr/sbin/nssldap-update-ignoreusers

Atd is finally working for me now.

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NSS using LDAP+SSL breaks setuid applications like su and sudo
https://bugs.launchpad.net/bugs/423252
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