I was having the same problem (i.e. hanging Update Manager). I updated
with synaptic and then, after having read this thread, did...

apt-get -f install
apt-get clean
apt-get update
apt-get upgrade

All ran cleanly without error. Interestingly, apt-get upgrade found the
following...

xserver-xorg-core

I also had the newest version of libgksu2-0

-- 
Update Manager hangs in 8.04 LTS
https://bugs.launchpad.net/bugs/239358
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