It seems a little worse in hardy. For me, when the gksu just did not
work when the PAM configuration was modified. No matter how many times i
tried to launch synaptic from the menu it just would not launch. When I
launched it from the command prompt using sudo it worked. I tried
Uzahnd's solution of modified the finger print prompt to say
"Password:". I can log in at GDM using the finger print or password and
gksu works. However, sudo in the command line ignores the fingerprint
reader when I do this.

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modifying PAM configuration could break gksu
https://bugs.launchpad.net/bugs/86843
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