/etc/localtime will be overwritten with every update of the tzdata
package, so changing it manually without adapting /etc/timezone is not a
good idea. /etc/timezone should have the desired time zone, then
everything should work.
Preferably you should just do "sudo dpkg-reconfigure tzdata". Does that
work for you?
** Changed in: tzdata (Ubuntu)
Status: New => Incomplete
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tzdata upgrade changes zone
https://bugs.launchpad.net/bugs/209387
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