Yeah... if you install the themes system-wide, this doesn't happen.
That said, this is not the case in Hardy. Default install, Synaptic is fine.
May be true for Gutsy too?
** Changed in: synaptic (Ubuntu)
Status: Confirmed => Fix Released
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Synaptic gtk+ 2 theme incompatiblity
https://bugs.launchpad.net/bugs/172492
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