If you want Synaptic to stop warning you you could just let synaptic
update then overwrite the file at /usr/bin/nt with  the one in the fixed
DEB

If you extract the DEB using a RIGHT CLICK and EXTRACT HERE then,
extract the DATA in there,  you can just copy it over the top of the
broken one.

sudo cp ./d4x_2.5.7.1-4ubuntu1_i386/usr/bin/nt /usr/bin/nt

When the next version comes out, synaptic will just install the package
over the one you wrote.

-- 
Downloader for X adds /'s to the link making it fail
https://bugs.launchpad.net/bugs/155368
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