Ok I fixed this for me following a hint from the last post on
http://ubuntuforums.org/showthread.php?t=637721. According to the guy in
the forum the SATA Contollers are double booked (whatever that means)
which apparently confuses ubuntu. The solution for me was to plug my
harddisk in a high numbered sata port, in my case port 6 worked like a
charm. Hope this helps.

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JMicron PATA/SATA Controller does not work
https://bugs.launchpad.net/bugs/57502
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