That comment was perhaps a bit confusing. Really after using this tool I find 
that the algorithm simply needs to be adjusted. I have found that it will only 
work unless the eyes are perfectly red. If there is pink, orange, or anything 
other than red, it just leaves it alone and changes the red pixels and ignores 
everything else. More often than not the tool will only change a fraction of 
the eye and leave the rest orange, pink or white.
My suggestion in the previous comment is just that if you can define the area 
of the eye, it might make it easier for the algorithm to handle. This way it 
knows that the eye has a pupil, since orange or pink is not a natural eye 
colour it can change it to grey/black as a pupil should be.

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gThumb red eye reduction does not work
https://bugs.launchpad.net/bugs/85780
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