Known problem not related to linux.
To repeat:
0. Make backup! Mandatory!
1. Hibernate windows
2. Boot to another windows OS (USB stick, connect HDD to another windows OS)
3. Run defrag system partition hibernated system.
4. Try to wake up system.
You have broken FS. The only way - to restore from backup.

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https://bugs.launchpad.net/bugs/506545

Title:
  possible fs crash in "hibernated" windows

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