Hi Boris,
the real fix is on the way, but it will need to complete in 18.10 first (where 
currently we have Beta Freeze) and then also needs some time to SRU into Bionic.

For now you can modify your config file in /etc/apparmor.d/usr.lib.ipsec.charon 
and add the line
 @{PROC}/@{pid}/fd/ r,
That should resolve the access to the PID being an issue.

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https://bugs.launchpad.net/bugs/1786250

Title:
  strongswan (charon) is rejected by apparmor to read /proc/<PID>/fd

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