Try this on a console:
$ sudo rmmod pata_jmicron
$ sudo modprobe pata_jmicron

As for me it solves the problem an the disks are detected and
functional, I haven't though experimented much trouble with my cd drive
after upgrading to feisty, but I can't certify this :(

-- 
Hard drive connected on JMicron PATA does not work
https://bugs.launchpad.net/bugs/126113
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