So I'm the OP on this bug report from what seems like ages ago...
While a lot of hard work as been done by some of the members posting
here to try and replicate it, it's been very difficult to track the
specific event that has been causing this.    While we "fixed" our
problem a long time ago by moving all the VM's effected to a server and
disabling Hyper-V nightly snapshots, instead opting to shut down all
VM's once a month on a weekend and shapshot the whole system and bring
it back online, it hasn't been optimal.

Lately, we've been upgrading the 14.04LTS systems one at a time to 16.04
with the latest kernel and dropping them back into active nightly backup
systems and so far, have not seen a read-only file system failure with
systems running the latest updates.   Now these systems are not write
heavy either, which tends to trigger this bug more often.  At least
we've seen some improvement in our environment just by keeping up to
date with the latest distribution updates.  Outside of this, microsoft
has released server 2016 during our lifetime, and while we are not
running, it would be interesting to see if that Hyper-V server OS is any
better/worse then 2012R2.

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https://bugs.launchpad.net/bugs/1470250

Title:
  [Hyper-V] Ubuntu 14.04.2 LTS Generation 2 SCSI Errors on VSS Based
  Backups

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