I think that definitely the problem is that the source package ffmpeg should be 
configured with these options (I don't know which one)
  --enable-amr_nb          enable amr_nb float audio codec
  --enable-amr_nb-fixed    use fixed point for amr-nb codec
  --enable-amr_wb          enable amr_wb float audio codec
  --enable-amr_if2         enable amr_wb IF2 audio codec

in debian/rules none of them is enabled.

-- 
Totem cannot play AMR even when medibuntu libavcodec installed
https://bugs.launchpad.net/bugs/110461
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