With apt-utils 1.2.4, the behavior has changed: 5 packages are not even
listed in Packages anymore, including nemo_2.8.6-11_amd64.deb package:

Here, 24 packages are located in the folder:

Ubuntu/dists/wily/system-tools/binary-amd64# ll *.deb
-rw-r--r-- 1 root           root            1116256 Mar  5 12:19 
apt_1.2.4_amd64.deb
-rw-r--r-- 1 root           root             342418 Mar  5 12:19 
apt-doc_1.2.4_all.deb
-rw-r--r-- 1 root           root             151352 Mar  5 12:19 
apt-transport-https_1.2.4_amd64.deb
-rw-r--r-- 1 root           root             387240 Mar  5 12:19 
apt-utils_1.2.4_amd64.deb
-rw-r--r-- 1 actionmystique actionmystique 12244162 Feb 28 16:02 
gimp_2.9.2-11_amd64.deb
-rw-rw-r-- 1 actionmystique actionmystique  3663042 Feb 23 11:21 
git_2.6.0-11_amd64.deb
-rw-rw-r-- 1 actionmystique actionmystique  3647806 Feb 23 11:21 
git_2.6.3-11_amd64.deb
-rw-r--r-- 1 actionmystique actionmystique  3684722 Feb 28 12:03 
git_2.7.2-11_amd64.deb
-rw-rw-r-- 1 actionmystique actionmystique  1646294 Feb 23 11:21 
gparted_0.24.0-11_amd64.deb
-rw-rw-r-- 1 actionmystique actionmystique  1653508 Feb 28 15:32 
gparted_0.25.0-11_amd64.deb
-rw-r--r-- 1 root           root             180902 Mar  5 12:19 
libapt-inst2.0_1.2.4_amd64.deb
-rw-r--r-- 1 root           root             813750 Mar  5 12:19 
libapt-pkg5.0_1.2.4_amd64.deb
-rw-r--r-- 1 root           root             221594 Mar  5 12:19 
libapt-pkg-dev_1.2.4_amd64.deb
-rw-r--r-- 1 root           root             994680 Mar  5 12:20 
libapt-pkg-doc_1.2.4_all.deb
-rw-r--r-- 1 actionmystique actionmystique   408538 Feb 28 14:21 
libbabl-0.1-0_0.1.16-11_amd64.deb
-rw-r--r-- 1 actionmystique actionmystique 21538808 Feb 28 14:00 
libgegl-0.3-0_0.3.4-11_amd64.deb
-rw-r--r-- 1 actionmystique actionmystique  1072388 Mar  5 12:46 
nemo_2.8.6-11_amd64.deb
-rw-rw-r-- 1 actionmystique actionmystique    25388 Feb 23 11:21 
nemo-fileroller_2.8.1-11_amd64.deb
-rw-r--r-- 1 actionmystique actionmystique   129268 Feb 23 11:21 
nemo-gtkhash_0.7.0-11_amd64.deb
-rw-r--r-- 1 actionmystique actionmystique   779684 Mar  2 11:45 
realtek-wifi-drivers_4.2.6-10_amd64.deb
-rw-rw-r-- 1 actionmystique actionmystique   781530 Feb 23 11:21 
realtek-wifi-drivers_4.2-rc1-10_amd64.deb
-rw-rw-r-- 1 actionmystique actionmystique   533770 Feb 23 11:21 
redis-server_3.0.4-10_amd64.deb
-rw-r--r-- 1 actionmystique actionmystique   538628 Feb 23 11:21 
redis-server_3.0.7-10_amd64.deb
-rw-rw-r-- 1 actionmystique actionmystique  1071418 Feb 23 11:21 
xca_1.3.2-10_amd64.deb

Only 19 packages are described in Packages (cf. attached file).
I have also uploaded the config file I use for apt-ftparchive.

I can't find what the 5 missing packages have in common to explain this
issue.


** Attachment added: "Packages file"
   
https://bugs.launchpad.net/ubuntu/+source/apt/+bug/1550726/+attachment/4589424/+files/Packages

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https://bugs.launchpad.net/bugs/1550726

Title:
  [apt-utils] Some packages are missing in Packages built by apt-
  ftparchive

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