run 'blkid' and check if you have identical UUIDs

if yes, you may be affected by the same problem as me; i've recently
cloned my partititions (using dd), and I didn't realize (or even
thought!) that the ubuntu will sometimes use the one, and in other times
the other partition (one was on SSD, one on spinning drive)

I fixed the problem by:

1. booting into 'try ubuntu'
2. running gparted and generating new UUIDs
3. editing /etc/fstab (to set the new UUIDs)
4. and doing 'rsync' to copy over my new data (from the old destination)

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https://bugs.launchpad.net/bugs/1306237

Title:
  Ubuntu 14.04 final beta - files disappearing

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