can you try hda-analyzer to change those gpio as same as working alsa-
info


-State of AFG node 0x01:
-  Power states:  D0 D1 D2 D3 D3cold S3D3cold CLKSTOP EPSS
-  Power: setting=D0, actual=D0
 GPIO: io=5, o=0, i=0, unsolicited=1, wake=1
-  IO[0]: enable=1, dir=1, wake=0, sticky=0, data=1, unsol=0
+  IO[0]: enable=1, dir=1, wake=0, sticky=0, data=0, unsol=0
   IO[1]: enable=0, dir=0, wake=0, sticky=0, data=0, unsol=0
   IO[2]: enable=0, dir=0, wake=0, sticky=0, data=0, unsol=0
   IO[3]: enable=0, dir=0, wake=0, sticky=0, data=0, unsol=0
   IO[4]: enable=0, dir=0, wake=0, sticky=0, data=0, unsol=0

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https://bugs.launchpad.net/bugs/1242891

Title:
  [HDA-Intel - HDA Intel PCH, playback] Playback problem & LED problem

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