I have the same problem with a wired USB Microsoft mouse.  I have to log
off and back on after a reboot to get the mouse to work reliably.
Otherwise, the cursor will move, but I can't click on anything.  This
behavior will cut in and out every minute or 2 until I log off and back
on.  The USB wired keyboard continues to work normally throughout.

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https://bugs.launchpad.net/bugs/1006145

Title:
  Logitech Mouse not recognised on boot in 12.04

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