To sum up the discussion on IRC:

The configure script checks the existence of
PaMacCore_GetStreamInputDevice in pa_mac_core.h, which is used in
src/px_mac_coreaudio.c. Afterwards it checks if src/px_mac_coreaudio.c
should be built.

On Ubuntu, we don't want to build src/px_mac_coreaudio.c and we don't
have the required AudioUnit/AudioUnit.h header.

The fix (suggested by Matthias) is to only run the AC_EGREP_HEADER test,
if you build src/px_mac_coreaudio.c.

-- 
audacity 1.3.12-5 FTBFS on maverick
https://bugs.launchpad.net/bugs/629955
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