The problem also exists with icedtea6-1.8, version:

java version "1.6.0_18"
OpenJDK Runtime Environment (IcedTea6 1.8+rc691bc07c5e0) (Ubuntu build 
1.6.0_18-b18)
OpenJDK 64-Bit Server VM (build 14.0-b16, mixed mode)

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glassfish v3 does not run under openjdk-6
https://bugs.launchpad.net/bugs/559286
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