There seems to be two bugs discussed here.
One is related to "no_proxy" environment variable having an extraneous comma at 
the end.
This bug exists in both 64 and 32 bit versions confirmed (I use 64 bit while 
two of my colleagues - 32 bit).

The other one has to do with "http_proxy" not being passed on by "sudo". This 
leads to apt commands failing to connect.
This concerns adding apt repository and repository public key through command 
line and some other command line package operations. This indeed affects 64 bit 
edition only.

On a separate note, I installed Fedora 13 and after configuring proxy in gnome 
proxy settings and a restart both GUI and command line tools worked like a 
charm. Come on, Ubuntu,  you don't have to be more difficult than Fedora in 
ease of use :)
No offense intended.

-- 
wget does not use network proxy in some cases
https://bugs.launchpad.net/bugs/232469
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