I have quite similar problem:

On normal boot keyboard and mouse freeze (few seconds after GDM prompt).
On rescue boot + resume (no X, just console) it freezes  too (few seconds after 
login prompt) => not an X issue
On rescue boot + failsafeX everything works fine
On rescue boot + root / netroot login + manual gdm start everything works fine 
=> not an X issue

With a good timing, when a key is being pressed in the same moment as
the freeze happens, this key is repeated infinitely.

I tried to compare ps -A outputs to check what additional process are
started on normal/resume boot (via ssh when input has been disabled),
but haven't found anything interesting.

Tested keyboard + mouse setups:
Microsoft Wireless Keyboard 3000 v2.0 + Microsoft Wireless Mouse 5000 (shared 
USB receiver).
Old PSX keyboard + Logitech USB - keyboard freezed, mouse functioned properly.

When I have removed my custom xorg.conf (nvidia driver & tweenview
setup), gnome usually works (same xorg.conf works fine during rescue
boot + netroot + manual gdm), but it still doesn't fix the rescue+resume
console login (no X at this time).

Well, I'll have to stick to rescue + netroot + manual gdm option for
some time :/

-- 
Keyboard and mouse freeze after grub
https://bugs.launchpad.net/bugs/555169
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