I have a similar problem with lvm. But I don't know if it's the same.
Sometimes (very often indeed) during boot process, my lvm volumes are mounted 
but empty ! Of course, I'm unable to access to my desktop. 
After some boots, my volumes are good and all works fine.
dmesg not show anything.

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LVM Not mounting in Lucid
https://bugs.launchpad.net/bugs/527666
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