Shot, finally I had some time for testing with other kernels and these are my 
results.
Versions are expressed as shown in the "Installed version" column of Synaptic.

Ubuntu-specific kernels

2.6.31-20.57 - Doesn't work
2.6.31-19.56 - Doesn't work
2.6.31-18.55 - Doesn't work
2.6.31-17.54 - Doesn't work
2.6.28-16.55 - Works

Ubuntu mainline kernels

2.6.32-02063208 - Doesn't work
2.6.31-02063112 - Doesn't work
2.6.30-02063010 - Works

There are chances the bug was introduced in 2.6.31 vanilla kernel. Now
I'm staying with 2.6.30, which works and allows me to do the (simple) 3D
tasks I need.

I'm here for any other test or update. Sadly I still can't check the
disk controller path (#182).

Bye,
Marco

-- 
2.6.28-11 causes massive data corruption on 64 bit installations
https://bugs.launchpad.net/bugs/346691
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