I, too, had a similar problem (with nvidia-glx-195 on a Karmic box), and
the problem cleared up after I installed linux-headers-generic-pae.  I'm
now successfully running 2.6.31-16-generic-pae and nvidia-glx-195 and
seeing all 4 GB of RAM in my system.

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Nvidia fail with DKMS on linux-generic-pae - needs depends on -pae kernel 
header file package
https://bugs.launchpad.net/bugs/454220
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