My system is localized with french canadian language. You could test
gwave after changing your localization (but this would necessitate some
package fetching and installing). How does the LC_NUMERIC switch works?
I believe the "keyword" for french localization is fr_CA.

So this would be like LC_NUMERIC=fr_CA, but I don't know if this would
work. In french, we do use ',' instead of '.' as the decimal point
specifier. So you seem right about the problem cause.

I have included a new screenshot displaying the behavior of the
unpatched gwave on my system, when I try to plot the initial data.out
file posted above.

** Attachment added: "The behavior of gwave on a french canadian localized 
system when plotting ascii data"
   
http://launchpadlibrarian.net/35768217/unpatched%20gwave%20%28displaying%20data.out%29.png

-- 
Gwave runs but doesn't plot
https://bugs.launchpad.net/bugs/482748
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