I'm also having same problem (some buttons stay pressed - don't work)
with updated Karmic 64-bit.

I'm having problems with eclipse downloaded directly from
www.eclipse.org

The solution was the trick setting env var GDK_NATIVE_WINDOWS=1 before
laucnhing eclipse bin.

Raine

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Eclipse GTK is not working correct - especially buttons
https://bugs.launchpad.net/bugs/443004
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