Having this same issue of high cpu usage since this morning after
several updates including misc x stuff such as libmesa and also some
linuxheaders.

Tried the logout, log back in. Nothing.
Read about this being only for Intel chipset/graphics, I have a weird ATI 
chipset/Nvidia graphics combo, so no dice. Also no SSD.
Read about cryptdisk having something to do about it but I dont have it 
installed (nor was it ever installed), so nothing again.

One thing in common with others, been having some issues with splash in boot 
for a couple of days now, first it would give me some garbage and stop the boot 
process. Then after some updates it apparently got better, still garbage but  
would eventually get GDM.
Disabled it from the kernel boot line and everything seemed ok, until this 
mornings updates.

So I can login, did a workaround, started in recovery mode, logged
console style, no gdm. Startx gives me my desktop, but again with the
high cpu usage, as far as I know GDM is not around so I would dare say
is not GDM but X.

Something funny happened in one of my attempts to fix this. I was browsing, 
looking for alternatives, reading this thread, spent some minutes working while 
enduring the high cpu usage.
Went to reboot and Gnome asked -via a dialog- if I was sure, because an unknow 
program was working. The moment this dialog showed up CPU usage dropped to 
normal. Click cancel, go  back to desktop and for a couple of seconds 
everything remained nominal, but after a couple of clicks here and there CPU 
usage went back to high.
Tried to repeat the whole reboot process but this time I didnt get a question 
and so the computer went ahead with the reboot.

Very funky stuff.

-- 
[karmic] Xorg 100% CPU utilization -- only after first login
https://bugs.launchpad.net/bugs/439138
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