Thanks Scott, I've tried mountall 0.2.0~boot3 and did see partial
success. The uniofs-fuse line does get mounted every time.

The following bind mount does appear to be mounted correctly too, but when I 
look inside /home/user/files it's all empty. I still have to sudo mount 
/home/user/files to get it right.
I've noticed that for some reason mtab has the bind mount already listed before 
mountall is run in /etc/init/mountall.conf, but it's not in /proc/mounts.

Then the swap file didn't get mounted with complaints of a readonly file
system it's on. That didn't happen before. I'll attach logs below.

Also hangs are back. Before reboot mountall would never return until I removed 
the erroneous line
varxapian      /var/lib/apt-xapian-index tmpfs 
defaults,noexec,nosuid,nodev,mode=0755 0 0
I have xapian-index uninstalled so the mount point is missing.

Booting my system after that would hang every time, even with all
offending lines (swapfile, xapian-index , spurious line break in
commented gdm mount) removed. It always hangs after "* init start
crypto-disks...", in fact it still sits there in console 1 as I have
tricked my way in in console 2.

I'll attach log files below.

-- 
unionfs-fuse not handled
https://bugs.launchpad.net/bugs/432571
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