This patch will fix it:
--- php-mode.emacsen-install.orig       2007-02-08 01:07:16.000000000 -0600
+++ php-mode.emacsen-install    2007-02-08 00:57:19.000000000 -0600
@@ -16,7 +16,7 @@
 if [ ${FLAVORTEST} = xemacs ] ; then
     SITEFLAG="-no-site-file"
 else
-    SITEFLAG="--no-site-file"
+    SITEFLAG=""
 fi
 FLAGS="${SITEFLAG} -q -batch -l path.el -f batch-byte-compile"

Here are detailed instructions on how I modified the source and compiled the 
binaries:
http://speeves.erikin.com/2007/02/ubuntu-php-mode-fails-to-install.html

-- 
will not install from apt-get
https://launchpad.net/bugs/36055

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