Huh, it turns out that jack support was intentionally disabled in Ubuntu:
http://launchpadlibrarian.net/22657643/portaudio19_19%2Bsvn20071207-0ubuntu5_19%2Bsvn20071207-0ubuntu6.diff.gz

Because jack is not in main, portaudio cannot depend on it. How can this
be resolved?

** Also affects: portaudio19 (Ubuntu)
   Importance: Undecided
       Status: New

** Changed in: portaudio19 (Ubuntu)
       Status: New => Confirmed

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Please compile portaudio with Jack support
https://bugs.launchpad.net/bugs/360590
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