that's same problem with 
upgrade process
in "update-motd" error
in the log:

Errors were encountered while processing:
 update-motd
E: Sub-process /usr/bin/dpkg returned an error code (1)

I'm use the order
$ sudo /etc/init.d/update-motd stop

And continued  upgrade it's no problem

-- 
multiple running instances of update-motd cause errors
https://bugs.launchpad.net/bugs/394556
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