If it's looking for libpcsclite.so rather than libpcsclite.so.1, then
you simply need to install the libpcsclite-dev package.

In any case, this is a bug in the JVM, not in pcsc-lite, and should be
reassigned. Which version of the JVM are you using? The ones shipped in
Ubuntu are sun-java5, sun-java6, and openjdk-6.

-- 
libpcsclite1 is not found by sun-java-6 (jaunty)
https://bugs.launchpad.net/bugs/378294
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