I think this is probably related:
I'm currently using Ubuntu 9.04, with kernel 2.6.28-11-generic #42-Ubuntu SMP 
x86-64.
Some programs have problems with UDP checksums, and others don't. When 
analyzing traffic with wireshark, all of the packets sent from any of the 
affected programs show up as having a bad checksum, no matter
2 programs that I've noticed specifically that have this problem is a java 
application that uses java.net to send udp packets, and netcat. For these 
programs it happens no matter which interface I send the packet out on (ath0, 
eth0, or loopback). However, if I unplug my network card, everything works as 
expected.

I'm having absolutely no problem using other udp programs (DNS, etc work
fine). netcat works fine in tcp, but not udp. sendip works for udp, but
I think it is possible sendip computes the checksums itself.

Relavent line from lspci:
00:19.0 Ethernet controller: Intel Corporation 82566MC Gigabit Network 
Connection (rev 03)

-- 
Wrong UDP Packets Checksum
https://bugs.launchpad.net/bugs/127749
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